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Model info
Transcription factorRELA
(GeneCards)
ModelTF65_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusndGGGRvTTTCChvn
Best auROC (human)0.988
Best auROC (mouse)0.91
Peak sets in benchmark (human)188
Peak sets in benchmark (mouse)99
Aligned words504
TF familyNF-kappaB-related factors {6.1.1}
TF subfamilyNF-kappaB p65 subunit-like factors {6.1.1.2}
HGNCHGNC:9955
EntrezGeneGeneID:5970
(SSTAR profile)
UniProt IDTF65_HUMAN
UniProt ACQ04206
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.285160000000001
0.0005 10.54431
0.0001 15.28351
GTEx tissue expression atlas RELA expression
ReMap ChIP-seq dataset list RELA datasets
Motifs in JASPAR
MA0107.1 (RELA; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0168.03.034.024.071.05.011.040.044.05.015.024.057.04.059.035.0
020.01.0236.03.00.00.016.01.00.01.0118.00.00.00.0123.00.0
030.00.00.00.00.00.02.00.03.01.0483.06.01.01.02.00.0
042.00.01.01.01.00.00.01.01.01.0450.035.01.00.03.02.0
053.00.02.00.01.00.00.00.0185.02.0251.016.010.00.026.03.0
0673.096.024.06.01.00.00.01.0178.050.031.020.010.04.01.04.0
07102.07.05.0148.05.02.00.0143.04.01.00.051.02.00.00.029.0
0822.010.08.073.01.00.01.08.01.00.00.04.00.07.07.0357.0
093.012.00.09.00.01.00.016.02.06.01.07.08.064.05.0365.0
100.013.00.00.03.080.00.00.00.05.01.00.011.0354.01.031.0
110.014.00.00.021.0401.01.029.00.01.01.00.01.015.02.013.0
125.09.04.04.0212.0131.025.063.03.00.00.01.04.010.018.010.0
1355.046.0100.023.093.031.010.016.07.011.021.08.010.017.037.014.0
1446.026.077.016.039.014.014.038.049.041.049.029.013.09.026.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.773-2.2320.085-0.2580.816-1.768-1.020.2460.341-1.768-0.719-0.2580.597-1.9730.6320.114
02-4.398-3.1242.013-2.232-4.398-4.398-0.656-3.124-4.398-3.1241.322-4.398-4.398-4.3981.363-4.398
03-4.398-4.398-4.398-4.398-4.398-4.398-2.582-4.398-2.232-3.1242.728-1.598-3.124-3.124-2.582-4.398
04-2.582-4.398-3.124-3.124-3.124-4.398-4.398-3.124-3.124-3.1242.6580.114-3.124-4.398-2.232-2.582
05-2.232-4.398-2.582-4.398-3.124-4.398-4.398-4.3981.77-2.5822.075-0.656-1.112-4.398-0.179-2.232
060.8431.116-0.258-1.598-3.124-4.398-4.398-3.1241.7320.467-0.006-0.437-1.112-1.973-3.124-1.973
071.176-1.452-1.7681.547-1.768-2.582-4.3981.513-1.973-3.124-4.3980.487-2.582-4.398-4.398-0.072
08-0.344-1.112-1.3260.843-3.124-4.398-3.124-1.326-3.124-4.398-4.398-1.973-4.398-1.452-1.4522.426
09-2.232-0.936-4.398-1.213-4.398-3.124-4.398-0.656-2.582-1.598-3.124-1.452-1.3260.713-1.7682.449
10-4.398-0.858-4.398-4.398-2.2320.934-4.398-4.398-4.398-1.768-3.124-4.398-1.022.418-3.124-0.006
11-4.398-0.786-4.398-4.398-0.392.543-3.124-0.072-4.398-3.124-3.124-4.398-3.124-0.719-2.582-0.858
12-1.768-1.213-1.973-1.9731.9061.426-0.2180.697-2.232-4.398-4.398-3.124-1.973-1.112-0.541-1.112
130.5620.3851.157-0.31.084-0.006-1.112-0.656-1.452-1.02-0.39-1.326-1.112-0.5970.169-0.786
140.385-0.1790.896-0.6560.221-0.786-0.7860.1950.4470.2710.447-0.072-0.858-1.213-0.179-0.858