We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTCF7L1
(GeneCards)
ModelTF7L1_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
B
Motif rank
0
ConsensusnbCTTTSAWSYbn
Best auROC (human)0.922
Best auROC (mouse)0.747
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)10
Aligned words503
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7L1 (TCF-3) [1] {4.1.3.0.2}
HGNCHGNC:11640
EntrezGeneGeneID:83439
(SSTAR profile)
UniProt IDTF7L1_HUMAN
UniProt ACQ9HCS4
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.42661
0.0005 13.258125
0.0001 16.689059999999998
GTEx tissue expression atlas TCF7L1 expression
ReMap ChIP-seq dataset list TCF7L1 datasets
Motifs in JASPAR
MA1421.1 (TCF7L1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0112.025.017.012.027.058.021.040.013.080.027.034.015.052.032.035.0
021.062.03.01.04.0162.09.040.00.090.02.05.03.088.013.017.0
030.00.00.08.02.013.00.0387.00.00.00.027.03.00.00.060.0
040.00.00.05.00.01.00.012.00.00.00.00.00.012.04.0466.0
050.00.00.00.01.00.00.012.00.00.01.03.03.00.05.0475.0
060.02.02.00.00.00.00.00.00.00.06.00.023.090.0365.012.0
0719.00.00.04.080.02.02.08.0333.00.06.034.010.00.00.02.0
08170.01.04.0267.01.00.00.01.02.00.00.06.015.00.01.032.0
0920.039.0124.05.00.00.00.01.01.00.03.01.021.0158.0107.020.0
1016.01.04.021.021.033.03.0140.027.029.019.0159.02.07.01.017.0
115.020.012.029.05.028.012.025.05.08.04.010.021.099.085.0132.0
1213.07.04.012.040.045.018.052.08.033.052.020.026.045.067.058.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.938-0.22-0.599-0.938-0.1440.613-0.3920.244-0.860.932-0.1440.083-0.7210.5040.0230.112
02-3.1260.679-2.234-3.126-1.9751.636-1.2150.244-4.41.05-2.584-1.77-2.2341.027-0.86-0.599
03-4.4-4.4-4.4-1.328-2.584-0.86-4.42.505-4.4-4.4-4.4-0.144-2.234-4.4-4.40.646
04-4.4-4.4-4.4-1.77-4.4-3.126-4.4-0.938-4.4-4.4-4.4-4.4-4.4-0.938-1.9752.691
05-4.4-4.4-4.4-4.4-3.126-4.4-4.4-0.938-4.4-4.4-3.126-2.234-2.234-4.4-1.772.71
06-4.4-2.584-2.584-4.4-4.4-4.4-4.4-4.4-4.4-4.4-1.6-4.4-0.3021.052.447-0.938
07-0.49-4.4-4.4-1.9750.932-2.584-2.584-1.3282.355-4.4-1.60.083-1.114-4.4-4.4-2.584
081.684-3.126-1.9752.134-3.126-4.4-4.4-3.126-2.584-4.4-4.4-1.6-0.721-4.4-3.1260.023
09-0.4390.2191.369-1.77-4.4-4.4-4.4-3.126-3.126-4.4-2.234-3.126-0.3921.6111.222-0.439
10-0.658-3.126-1.975-0.392-0.3920.054-2.2341.49-0.144-0.074-0.491.617-2.584-1.454-3.126-0.599
11-1.77-0.439-0.938-0.074-1.77-0.108-0.938-0.22-1.77-1.328-1.975-1.114-0.3921.1450.9931.431
12-0.86-1.454-1.975-0.9380.2440.361-0.5430.504-1.3280.0540.504-0.439-0.1810.3610.7560.613