Check the newest release v13
Model info
Transcription factorTCF7L1
(GeneCards)
ModelTF7L1_HUMAN.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
B
Motif rank
0
ConsensusnbCTTTSAWSYbn
Best auROC (human)0.922
Best auROC (mouse)0.747
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)10
Aligned words503
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7L1 (TCF-3) [1] {4.1.3.0.2}
HGNCHGNC:11640
EntrezGeneGeneID:83439
(SSTAR profile)
UniProt IDTF7L1_HUMAN
UniProt ACQ9HCS4
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.42661
0.0005 13.258125
0.0001 16.689059999999998
GTEx tissue expression atlas TCF7L1 expression
ReMap ChIP-seq dataset list TCF7L1 datasets
Motifs in JASPAR
MA1421.1 (TCF7L1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0112.025.017.012.027.058.021.040.013.080.027.034.015.052.032.035.0
021.062.03.01.04.0162.09.040.00.090.02.05.03.088.013.017.0
030.00.00.08.02.013.00.0387.00.00.00.027.03.00.00.060.0
040.00.00.05.00.01.00.012.00.00.00.00.00.012.04.0466.0
050.00.00.00.01.00.00.012.00.00.01.03.03.00.05.0475.0
060.02.02.00.00.00.00.00.00.00.06.00.023.090.0365.012.0
0719.00.00.04.080.02.02.08.0333.00.06.034.010.00.00.02.0
08170.01.04.0267.01.00.00.01.02.00.00.06.015.00.01.032.0
0920.039.0124.05.00.00.00.01.01.00.03.01.021.0158.0107.020.0
1016.01.04.021.021.033.03.0140.027.029.019.0159.02.07.01.017.0
115.020.012.029.05.028.012.025.05.08.04.010.021.099.085.0132.0
1213.07.04.012.040.045.018.052.08.033.052.020.026.045.067.058.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.938-0.22-0.599-0.938-0.1440.613-0.3920.244-0.860.932-0.1440.083-0.7210.5040.0230.112
02-3.1260.679-2.234-3.126-1.9751.636-1.2150.244-4.41.05-2.584-1.77-2.2341.027-0.86-0.599
03-4.4-4.4-4.4-1.328-2.584-0.86-4.42.505-4.4-4.4-4.4-0.144-2.234-4.4-4.40.646
04-4.4-4.4-4.4-1.77-4.4-3.126-4.4-0.938-4.4-4.4-4.4-4.4-4.4-0.938-1.9752.691
05-4.4-4.4-4.4-4.4-3.126-4.4-4.4-0.938-4.4-4.4-3.126-2.234-2.234-4.4-1.772.71
06-4.4-2.584-2.584-4.4-4.4-4.4-4.4-4.4-4.4-4.4-1.6-4.4-0.3021.052.447-0.938
07-0.49-4.4-4.4-1.9750.932-2.584-2.584-1.3282.355-4.4-1.60.083-1.114-4.4-4.4-2.584
081.684-3.126-1.9752.134-3.126-4.4-4.4-3.126-2.584-4.4-4.4-1.6-0.721-4.4-3.1260.023
09-0.4390.2191.369-1.77-4.4-4.4-4.4-3.126-3.126-4.4-2.234-3.126-0.3921.6111.222-0.439
10-0.658-3.126-1.975-0.392-0.3920.054-2.2341.49-0.144-0.074-0.491.617-2.584-1.454-3.126-0.599
11-1.77-0.439-0.938-0.074-1.77-0.108-0.938-0.22-1.77-1.328-1.975-1.114-0.3921.1450.9931.431
12-0.86-1.454-1.975-0.9380.2440.361-0.5430.504-1.3280.0540.504-0.439-0.1810.3610.7560.613