We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTCF7L1
(GeneCards)
ModelTF7L1_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
B
Motif rank
0
ConsensusdbbCTTTSAWSWb
Best auROC (human)0.926
Best auROC (mouse)0.741
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)10
Aligned words500
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7L1 (TCF-3) [1] {4.1.3.0.2}
HGNCHGNC:11640
EntrezGeneGeneID:83439
(SSTAR profile)
UniProt IDTF7L1_HUMAN
UniProt ACQ9HCS4
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.821865
0.0005 6.656915
0.0001 8.32433
GTEx tissue expression atlas TCF7L1 expression
ReMap ChIP-seq dataset list TCF7L1 datasets
Motifs in JASPAR
PCM
ACGT
01120.069.0111.0200.0
0239.0140.0165.0156.0
0355.0204.0106.0135.0
0411.0402.024.063.0
053.023.01.0473.0
060.026.06.0468.0
075.00.05.0490.0
0821.087.0360.032.0
09447.010.09.034.0
10185.03.06.0306.0
1140.0191.0248.021.0
1286.049.027.0338.0
1336.0154.0137.0173.0
PWM
ACGT
01-0.04-0.584-0.1170.465
02-1.1380.1120.2750.219
03-0.8050.485-0.1630.076
04-2.3111.16-1.6-0.673
05-3.325-1.64-3.9031.322
06-4.4-1.525-2.8191.311
07-2.961-4.4-2.9611.357
08-1.725-0.3571.05-1.328
091.265-2.394-2.484-1.27
100.388-3.325-2.8190.888
11-1.1140.420.679-1.725
12-0.368-0.918-1.4890.987
13-1.2150.2060.0910.322