We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTcf7l1
ModelTF7L1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnbCTTTGAWvWbn
Best auROC (human)0.864
Best auROC (mouse)0.861
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)10
Aligned words222
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7L1 (TCF-3) [1] {4.1.3.0.2}
MGIMGI:1202876
EntrezGeneGeneID:21415
(SSTAR profile)
UniProt IDTF7L1_MOUSE
UniProt ACQ9Z1J1
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 11.475975
0.0005 13.442820000000001
0.0001 16.7994
GTEx tissue expression atlas Tcf7l1 expression
Motifs in JASPAR
MA1421.1 (TCF7L1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
013.015.09.012.07.022.07.027.04.020.018.010.05.021.024.018.0
020.018.01.00.00.059.01.018.00.050.01.07.01.048.08.010.0
030.00.00.01.01.02.00.0172.00.00.00.011.00.00.00.035.0
040.00.00.01.00.01.00.01.00.00.00.00.00.05.01.0213.0
050.00.00.00.00.00.00.06.00.00.00.01.00.01.00.0214.0
060.00.00.00.00.00.01.00.00.00.00.00.06.034.0180.01.0
075.00.00.01.029.00.00.05.0154.00.07.020.01.00.00.00.0
0880.00.02.0107.00.00.00.00.03.02.00.02.05.00.02.019.0
0912.019.053.04.01.00.01.00.00.01.03.00.014.053.043.018.0
1013.08.01.05.010.07.04.052.012.07.08.073.01.03.03.015.0
118.010.06.012.03.07.03.012.02.07.03.04.011.056.037.041.0
128.03.08.05.018.025.09.028.06.014.023.06.011.019.020.019.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.4490.076-0.42-0.141-0.6610.452-0.6610.654-1.1870.3580.255-0.318-0.9790.4060.5380.255
02-3.740.255-2.363-3.74-3.741.429-2.3630.255-3.741.265-2.363-0.661-2.3631.224-0.533-0.318
03-3.74-3.74-3.74-2.363-2.363-1.805-3.742.495-3.74-3.74-3.74-0.226-3.74-3.74-3.740.911
04-3.74-3.74-3.74-2.363-3.74-2.363-3.74-2.363-3.74-3.74-3.74-3.74-3.74-0.979-2.3632.709
05-3.74-3.74-3.74-3.74-3.74-3.74-3.74-0.808-3.74-3.74-3.74-2.363-3.74-2.363-3.742.713
06-3.74-3.74-3.74-3.74-3.74-3.74-2.363-3.74-3.74-3.74-3.74-3.74-0.8080.8822.541-2.363
07-0.979-3.74-3.74-2.3630.725-3.74-3.74-0.9792.385-3.74-0.6610.358-2.363-3.74-3.74-3.74
081.732-3.74-1.8052.022-3.74-3.74-3.74-3.74-1.449-1.805-3.74-1.805-0.979-3.74-1.8050.308
09-0.1410.3081.323-1.187-2.363-3.74-2.363-3.74-3.74-2.363-1.449-3.740.0091.3231.1150.255
10-0.064-0.533-2.363-0.979-0.318-0.661-1.1871.304-0.141-0.661-0.5331.641-2.363-1.449-1.4490.076
11-0.533-0.318-0.808-0.141-1.449-0.661-1.449-0.141-1.805-0.661-1.449-1.187-0.2261.3770.9661.068
12-0.533-1.449-0.533-0.9790.2550.578-0.420.69-0.8080.0090.496-0.808-0.2260.3080.3580.308