Model info
| Transcription factor | Tcf7l1 | ||||||||
| Model | TF7L1_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bbCTTTSAWSW | ||||||||
| Best auROC (human) | 0.867 | ||||||||
| Best auROC (mouse) | 0.865 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 10 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | TCF-7-related factors {4.1.3} | ||||||||
| TF subfamily | TCF-7L1 (TCF-3) [1] {4.1.3.0.2} | ||||||||
| MGI | MGI:1202876 | ||||||||
| EntrezGene | GeneID:21415 (SSTAR profile) | ||||||||
| UniProt ID | TF7L1_MOUSE | ||||||||
| UniProt AC | Q9Z1J1 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Tcf7l1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 55.0 | 148.0 | 150.0 | 147.0 |
| 02 | 61.0 | 210.0 | 105.0 | 124.0 |
| 03 | 7.0 | 408.0 | 27.0 | 58.0 |
| 04 | 5.0 | 13.0 | 0.0 | 482.0 |
| 05 | 0.0 | 33.0 | 5.0 | 462.0 |
| 06 | 7.0 | 0.0 | 6.0 | 487.0 |
| 07 | 20.0 | 72.0 | 388.0 | 20.0 |
| 08 | 450.0 | 7.0 | 9.0 | 34.0 |
| 09 | 203.0 | 2.0 | 6.0 | 289.0 |
| 10 | 48.0 | 190.0 | 238.0 | 24.0 |
| 11 | 74.0 | 57.0 | 30.0 | 339.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.805 | 0.167 | 0.18 | 0.16 |
| 02 | -0.705 | 0.514 | -0.172 | -0.008 |
| 03 | -2.694 | 1.174 | -1.489 | -0.754 |
| 04 | -2.961 | -2.163 | -4.4 | 1.34 |
| 05 | -4.4 | -1.298 | -2.961 | 1.298 |
| 06 | -2.694 | -4.4 | -2.819 | 1.351 |
| 07 | -1.77 | -0.543 | 1.124 | -1.77 |
| 08 | 1.272 | -2.694 | -2.484 | -1.27 |
| 09 | 0.48 | -3.573 | -2.819 | 0.831 |
| 10 | -0.938 | 0.415 | 0.638 | -1.6 |
| 11 | -0.516 | -0.771 | -1.389 | 0.99 |