We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTCF7L2
(GeneCards)
ModelTF7L2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusbbCTTTGATSYbb
Best auROC (human)0.962
Best auROC (mouse)0.888
Peak sets in benchmark (human)46
Peak sets in benchmark (mouse)10
Aligned words500
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7L2 (TCF-4) [1] {4.1.3.0.3}
HGNCHGNC:11641
EntrezGeneGeneID:6934
(SSTAR profile)
UniProt IDTF7L2_HUMAN
UniProt ACQ9NQB0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.372465
0.0005 6.2904599999999995
0.0001 8.12298
GTEx tissue expression atlas TCF7L2 expression
ReMap ChIP-seq dataset list TCF7L2 datasets
Motifs in JASPAR
MA0523.1 (TCF7L2; Homo sapiens)
PCM
ACGT
0149.0175.0154.0122.0
0243.0272.087.098.0
0310.0426.08.056.0
048.016.00.0476.0
051.027.016.0456.0
068.00.02.0490.0
0716.081.0390.013.0
08446.06.08.040.0
09126.04.08.0362.0
1012.0212.0268.08.0
1149.088.025.0338.0
1244.0128.0176.0152.0
1362.0115.0180.0143.0
PWM
ACGT
01-0.9180.3330.206-0.024
02-1.0440.771-0.357-0.24
03-2.3941.217-2.584-0.788
04-2.584-1.975-4.41.328
05-3.903-1.489-1.9751.285
06-2.584-4.4-3.5731.357
07-1.975-0.4271.129-2.163
081.263-2.819-2.584-1.114
090.008-3.126-2.5841.055
10-2.2340.5230.756-2.584
11-0.918-0.346-1.5610.987
12-1.0220.0230.3390.193
13-0.689-0.0820.3610.133