We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTcf7l2
ModelTF7L2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusnvnnbbCTTTGAWSYb
Best auROC (human)0.958
Best auROC (mouse)0.911
Peak sets in benchmark (human)46
Peak sets in benchmark (mouse)10
Aligned words500
TF familyTCF-7-related factors {4.1.3}
TF subfamilyTCF-7L2 (TCF-4) [1] {4.1.3.0.3}
MGIMGI:1202879
EntrezGeneGeneID:21416
(SSTAR profile)
UniProt IDTF7L2_MOUSE
UniProt ACQ924A0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.894110000000001
0.0005 11.88691
0.0001 15.85556
GTEx tissue expression atlas Tcf7l2 expression
Motifs in JASPAR
MA0523.1 (TCF7L2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0122.023.050.08.034.024.078.026.018.056.063.022.010.018.029.018.0
0229.016.023.016.035.026.022.038.035.079.081.025.017.017.021.019.0
0331.021.035.029.029.031.013.065.022.057.039.029.010.024.026.038.0
0415.019.046.012.020.042.043.028.018.035.030.030.08.060.058.035.0
054.028.024.05.015.085.019.037.021.0110.034.012.05.059.027.014.0
060.042.01.02.02.0242.012.026.00.098.02.04.00.052.014.02.0
070.00.00.02.02.021.01.0410.02.01.01.025.02.00.00.032.0
080.00.00.06.00.00.00.022.00.00.00.02.01.03.05.0460.0
090.00.00.01.00.00.00.03.00.00.00.05.09.00.00.0481.0
100.00.09.00.00.00.00.00.00.00.00.00.015.047.0410.018.0
1114.00.00.01.041.01.02.03.0377.04.05.033.016.01.00.01.0
12118.00.09.0321.02.00.00.04.03.00.01.03.08.00.05.025.0
137.032.090.02.00.00.00.00.00.01.013.01.08.0242.091.012.0
144.02.01.08.023.068.07.0177.019.032.010.0133.00.01.03.011.0
157.05.016.018.06.038.015.044.02.08.04.07.046.0105.056.0122.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.344-0.30.467-1.3260.085-0.2580.909-0.179-0.5410.580.697-0.344-1.112-0.541-0.072-0.541
02-0.072-0.656-0.3-0.6560.114-0.179-0.3440.1950.1140.9220.947-0.218-0.597-0.597-0.39-0.488
03-0.006-0.390.114-0.072-0.072-0.006-0.8580.728-0.3440.5970.221-0.072-1.112-0.258-0.1790.195
04-0.719-0.4880.385-0.936-0.4370.2940.318-0.106-0.5410.114-0.038-0.038-1.3260.6480.6150.114
05-1.973-0.106-0.258-1.768-0.7190.995-0.4880.169-0.391.2520.085-0.936-1.7680.632-0.142-0.786
06-4.3980.294-3.124-2.582-2.5822.038-0.936-0.179-4.3981.137-2.582-1.973-4.3980.506-0.786-2.582
07-4.398-4.398-4.398-2.582-2.582-0.39-3.1242.565-2.582-3.124-3.124-0.218-2.582-4.398-4.3980.025
08-4.398-4.398-4.398-1.598-4.398-4.398-4.398-0.344-4.398-4.398-4.398-2.582-3.124-2.232-1.7682.68
09-4.398-4.398-4.398-3.124-4.398-4.398-4.398-2.232-4.398-4.398-4.398-1.768-1.213-4.398-4.3982.724
10-4.398-4.398-1.213-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-0.7190.4062.565-0.541
11-0.786-4.398-4.398-3.1240.271-3.124-2.582-2.2322.481-1.973-1.7680.056-0.656-3.124-4.398-3.124
121.322-4.398-1.2132.32-2.582-4.398-4.398-1.973-2.232-4.398-3.124-2.232-1.326-4.398-1.768-0.218
13-1.4520.0251.052-2.582-4.398-4.398-4.398-4.398-4.398-3.124-0.858-3.124-1.3262.0381.063-0.936
14-1.973-2.582-3.124-1.326-0.30.773-1.4521.726-0.4880.025-1.1121.441-4.398-3.124-2.232-1.02
15-1.452-1.768-0.656-0.541-1.5980.195-0.7190.341-2.582-1.326-1.973-1.4520.3851.2050.581.355