We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTFDP1
(GeneCards)
ModelTFDP1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
C
Motif rank
0
ConsensusvvddSGCGGGAMdn
Best auROC (human)0.871
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words500
TF familyE2F-related factors {3.3.2}
TF subfamilyDp-1 {3.3.2.2}
HGNCHGNC:11749
EntrezGeneGeneID:7027
(SSTAR profile)
UniProt IDTFDP1_HUMAN
UniProt ACQ14186
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.7036599999999997
0.0005 4.59566
0.0001 6.43546
GTEx tissue expression atlas TFDP1 expression
ReMap ChIP-seq dataset list TFDP1 datasets
Motifs in JASPAR
MA1122.1 (TFDP1; Homo sapiens)
PCM
ACGT
01176.070.0199.055.0
02134.064.0259.043.0
03165.055.0208.072.0
04161.039.0214.086.0
0548.057.0391.04.0
0616.05.0472.07.0
0737.0437.07.019.0
0823.08.0452.017.0
094.023.0469.04.0
1039.016.0439.06.0
11416.010.065.09.0
12316.094.079.011.0
13240.059.0127.074.0
14155.090.0141.0114.0
PWM
ACGT
010.339-0.570.46-0.805
020.069-0.6580.722-1.044
030.275-0.8050.504-0.543
040.25-1.1380.533-0.368
05-0.938-0.7711.132-3.126
06-1.975-2.9611.32-2.694
07-1.1891.243-2.694-1.818
08-1.64-2.5841.276-1.92
09-3.126-1.641.313-3.126
10-1.138-1.9751.247-2.819
111.194-2.394-0.643-2.484
120.92-0.281-0.452-2.311
130.646-0.7370.016-0.516
140.213-0.3240.119-0.091