Model info
| Transcription factor | TFDP1 (GeneCards) | ||||||||
| Model | TFDP1_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 14 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvddSGCGGGAMdn | ||||||||
| Best auROC (human) | 0.871 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | E2F-related factors {3.3.2} | ||||||||
| TF subfamily | Dp-1 {3.3.2.2} | ||||||||
| HGNC | HGNC:11749 | ||||||||
| EntrezGene | GeneID:7027 (SSTAR profile) | ||||||||
| UniProt ID | TFDP1_HUMAN | ||||||||
| UniProt AC | Q14186 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | TFDP1 expression | ||||||||
| ReMap ChIP-seq dataset list | TFDP1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 176.0 | 70.0 | 199.0 | 55.0 |
| 02 | 134.0 | 64.0 | 259.0 | 43.0 |
| 03 | 165.0 | 55.0 | 208.0 | 72.0 |
| 04 | 161.0 | 39.0 | 214.0 | 86.0 |
| 05 | 48.0 | 57.0 | 391.0 | 4.0 |
| 06 | 16.0 | 5.0 | 472.0 | 7.0 |
| 07 | 37.0 | 437.0 | 7.0 | 19.0 |
| 08 | 23.0 | 8.0 | 452.0 | 17.0 |
| 09 | 4.0 | 23.0 | 469.0 | 4.0 |
| 10 | 39.0 | 16.0 | 439.0 | 6.0 |
| 11 | 416.0 | 10.0 | 65.0 | 9.0 |
| 12 | 316.0 | 94.0 | 79.0 | 11.0 |
| 13 | 240.0 | 59.0 | 127.0 | 74.0 |
| 14 | 155.0 | 90.0 | 141.0 | 114.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.339 | -0.57 | 0.46 | -0.805 |
| 02 | 0.069 | -0.658 | 0.722 | -1.044 |
| 03 | 0.275 | -0.805 | 0.504 | -0.543 |
| 04 | 0.25 | -1.138 | 0.533 | -0.368 |
| 05 | -0.938 | -0.771 | 1.132 | -3.126 |
| 06 | -1.975 | -2.961 | 1.32 | -2.694 |
| 07 | -1.189 | 1.243 | -2.694 | -1.818 |
| 08 | -1.64 | -2.584 | 1.276 | -1.92 |
| 09 | -3.126 | -1.64 | 1.313 | -3.126 |
| 10 | -1.138 | -1.975 | 1.247 | -2.819 |
| 11 | 1.194 | -2.394 | -0.643 | -2.484 |
| 12 | 0.92 | -0.281 | -0.452 | -2.311 |
| 13 | 0.646 | -0.737 | 0.016 | -0.516 |
| 14 | 0.213 | -0.324 | 0.119 | -0.091 |