We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTCF3
(GeneCards)
ModelTFE2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
0
ConsensusnbnbbnbbhbnnvCASCTGYn
Best auROC (human)0.955
Best auROC (mouse)0.987
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)60
Aligned words467
TF familyE2A-related factors {1.2.1}
TF subfamilyE2A (TCF-3, ITF-1) {1.2.1.0.1}
HGNCHGNC:11633
EntrezGeneGeneID:6929
(SSTAR profile)
UniProt IDTFE2_HUMAN
UniProt ACP15923
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.741060000000001
0.0005 9.88831
0.0001 14.060210000000001
GTEx tissue expression atlas TCF3 expression
ReMap ChIP-seq dataset list TCF3 datasets
Motifs in JASPAR
MA0091.1 (TAL1::TCF3; Homo sapiens)
MA0092.1 (Hand1::Tcf3; Mus musculus)
MA0522.1 (Tcf3; Mus musculus)
MA0522.2 (TCF3; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.036.019.017.032.071.011.031.013.085.026.016.08.045.023.04.0
0213.020.019.014.088.058.011.080.016.027.012.024.06.029.023.010.0
036.053.056.08.040.057.06.031.08.020.021.016.010.030.072.016.0
048.019.024.013.043.069.014.034.012.077.034.032.06.029.026.010.0
0517.012.019.021.056.046.016.076.019.030.022.027.011.025.023.030.0
0610.036.046.011.025.045.015.028.06.041.012.021.05.050.071.028.0
0713.020.011.02.039.094.09.030.018.060.041.025.04.032.026.026.0
0820.029.019.06.068.069.013.056.013.034.024.016.011.047.016.09.0
0912.039.053.08.043.063.015.058.07.026.029.010.06.034.042.05.0
1014.019.023.012.049.063.05.045.030.052.024.033.05.031.029.016.0
1110.043.033.012.046.046.011.062.026.034.015.06.014.046.040.06.0
1217.034.043.02.088.052.018.011.031.048.020.00.014.032.039.01.0
130.0147.02.01.00.0164.00.02.00.0119.01.00.00.013.01.00.0
140.00.00.00.0433.03.03.04.03.01.00.00.03.00.00.00.0
150.0127.0275.037.01.02.01.00.00.01.01.01.00.03.00.01.0
160.01.00.00.09.0112.09.03.016.0229.032.00.011.023.05.00.0
170.00.01.035.01.02.03.0359.00.00.02.044.00.00.01.02.0
180.00.01.00.00.00.02.00.00.02.05.00.02.04.0417.017.0
190.01.00.01.01.04.00.01.023.0232.058.0112.00.013.01.03.0
203.04.017.00.093.073.021.063.00.026.017.016.07.032.069.09.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.7560.244-0.386-0.4950.1270.918-0.9180.096-0.7561.097-0.077-0.554-1.2240.465-0.198-1.873
02-0.756-0.335-0.386-0.6841.1320.717-0.9181.037-0.554-0.04-0.834-0.156-1.4970.03-0.198-1.01
03-1.4970.6270.682-1.2240.3480.7-1.4970.096-1.224-0.335-0.288-0.554-1.010.0640.932-0.554
04-1.224-0.386-0.156-0.7560.420.889-0.6840.187-0.8340.9990.1870.127-1.4970.03-0.077-1.01
05-0.495-0.834-0.386-0.2880.6820.487-0.5540.986-0.3860.064-0.242-0.04-0.918-0.116-0.1980.064
06-1.010.2440.487-0.918-0.1160.465-0.617-0.004-1.4970.373-0.834-0.288-1.6670.5690.918-0.004
07-0.756-0.335-0.918-2.4820.3231.197-1.1110.064-0.4390.7510.373-0.116-1.8730.127-0.077-0.077
08-0.3350.03-0.386-1.4970.8750.889-0.7560.682-0.7560.187-0.156-0.554-0.9180.508-0.554-1.111
09-0.8340.3230.627-1.2240.420.799-0.6170.717-1.351-0.0770.03-1.01-1.4970.1870.397-1.667
10-0.684-0.386-0.198-0.8340.5490.799-1.6670.4650.0640.608-0.1560.158-1.6670.0960.03-0.554
11-1.010.420.158-0.8340.4870.487-0.9180.783-0.0770.187-0.617-1.497-0.6840.4870.348-1.497
12-0.4950.1870.42-2.4821.1320.608-0.439-0.9180.0960.529-0.335-4.313-0.6840.1270.323-3.027
13-4.3131.643-2.482-3.027-4.3131.752-4.313-2.482-4.3131.432-3.027-4.313-4.313-0.756-3.027-4.313
14-4.313-4.313-4.313-4.3132.721-2.132-2.132-1.873-2.132-3.027-4.313-4.313-2.132-4.313-4.313-4.313
15-4.3131.4972.2680.271-3.027-2.482-3.027-4.313-4.313-3.027-3.027-3.027-4.313-2.132-4.313-3.027
16-4.313-3.027-4.313-4.313-1.1111.372-1.111-2.132-0.5542.0850.127-4.313-0.918-0.198-1.667-4.313
17-4.313-4.313-3.0270.216-3.027-2.482-2.1322.534-4.313-4.313-2.4820.443-4.313-4.313-3.027-2.482
18-4.313-4.313-3.027-4.313-4.313-4.313-2.482-4.313-4.313-2.482-1.667-4.313-2.482-1.8732.684-0.495
19-4.313-3.027-4.313-3.027-3.027-1.873-4.313-3.027-0.1982.0980.7171.372-4.313-0.756-3.027-2.132
20-2.132-1.873-0.495-4.3131.1870.946-0.2880.799-4.313-0.077-0.495-0.554-1.3510.1270.889-1.111