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Model info
Transcription factorTCF3
(GeneCards)
ModelTFE2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length21
Quality
A
Motif rank
0
ConsensusnbnbbnbbhbnnvCASCTGYn
Best auROC (human)0.955
Best auROC (mouse)0.987
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)60
Aligned words467
TF familyE2A-related factors {1.2.1}
TF subfamilyE2A (TCF-3, ITF-1) {1.2.1.0.1}
HGNCHGNC:11633
EntrezGeneGeneID:6929
(SSTAR profile)
UniProt IDTFE2_HUMAN
UniProt ACP15923
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.741060000000001
0.0005 9.88831
0.0001 14.060210000000001
GTEx tissue expression atlas TCF3 expression
ReMap ChIP-seq dataset list TCF3 datasets
Motifs in JASPAR
MA0091.1 (TAL1::TCF3; Homo sapiens)
MA0092.1 (Hand1::Tcf3; Mus musculus)
MA0522.1 (Tcf3; Mus musculus)
MA0522.2 (TCF3; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.036.019.017.032.071.011.031.013.085.026.016.08.045.023.04.0
0213.020.019.014.088.058.011.080.016.027.012.024.06.029.023.010.0
036.053.056.08.040.057.06.031.08.020.021.016.010.030.072.016.0
048.019.024.013.043.069.014.034.012.077.034.032.06.029.026.010.0
0517.012.019.021.056.046.016.076.019.030.022.027.011.025.023.030.0
0610.036.046.011.025.045.015.028.06.041.012.021.05.050.071.028.0
0713.020.011.02.039.094.09.030.018.060.041.025.04.032.026.026.0
0820.029.019.06.068.069.013.056.013.034.024.016.011.047.016.09.0
0912.039.053.08.043.063.015.058.07.026.029.010.06.034.042.05.0
1014.019.023.012.049.063.05.045.030.052.024.033.05.031.029.016.0
1110.043.033.012.046.046.011.062.026.034.015.06.014.046.040.06.0
1217.034.043.02.088.052.018.011.031.048.020.00.014.032.039.01.0
130.0147.02.01.00.0164.00.02.00.0119.01.00.00.013.01.00.0
140.00.00.00.0433.03.03.04.03.01.00.00.03.00.00.00.0
150.0127.0275.037.01.02.01.00.00.01.01.01.00.03.00.01.0
160.01.00.00.09.0112.09.03.016.0229.032.00.011.023.05.00.0
170.00.01.035.01.02.03.0359.00.00.02.044.00.00.01.02.0
180.00.01.00.00.00.02.00.00.02.05.00.02.04.0417.017.0
190.01.00.01.01.04.00.01.023.0232.058.0112.00.013.01.03.0
203.04.017.00.093.073.021.063.00.026.017.016.07.032.069.09.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.7560.244-0.386-0.4950.1270.918-0.9180.096-0.7561.097-0.077-0.554-1.2240.465-0.198-1.873
02-0.756-0.335-0.386-0.6841.1320.717-0.9181.037-0.554-0.04-0.834-0.156-1.4970.03-0.198-1.01
03-1.4970.6270.682-1.2240.3480.7-1.4970.096-1.224-0.335-0.288-0.554-1.010.0640.932-0.554
04-1.224-0.386-0.156-0.7560.420.889-0.6840.187-0.8340.9990.1870.127-1.4970.03-0.077-1.01
05-0.495-0.834-0.386-0.2880.6820.487-0.5540.986-0.3860.064-0.242-0.04-0.918-0.116-0.1980.064
06-1.010.2440.487-0.918-0.1160.465-0.617-0.004-1.4970.373-0.834-0.288-1.6670.5690.918-0.004
07-0.756-0.335-0.918-2.4820.3231.197-1.1110.064-0.4390.7510.373-0.116-1.8730.127-0.077-0.077
08-0.3350.03-0.386-1.4970.8750.889-0.7560.682-0.7560.187-0.156-0.554-0.9180.508-0.554-1.111
09-0.8340.3230.627-1.2240.420.799-0.6170.717-1.351-0.0770.03-1.01-1.4970.1870.397-1.667
10-0.684-0.386-0.198-0.8340.5490.799-1.6670.4650.0640.608-0.1560.158-1.6670.0960.03-0.554
11-1.010.420.158-0.8340.4870.487-0.9180.783-0.0770.187-0.617-1.497-0.6840.4870.348-1.497
12-0.4950.1870.42-2.4821.1320.608-0.439-0.9180.0960.529-0.335-4.313-0.6840.1270.323-3.027
13-4.3131.643-2.482-3.027-4.3131.752-4.313-2.482-4.3131.432-3.027-4.313-4.313-0.756-3.027-4.313
14-4.313-4.313-4.313-4.3132.721-2.132-2.132-1.873-2.132-3.027-4.313-4.313-2.132-4.313-4.313-4.313
15-4.3131.4972.2680.271-3.027-2.482-3.027-4.313-4.313-3.027-3.027-3.027-4.313-2.132-4.313-3.027
16-4.313-3.027-4.313-4.313-1.1111.372-1.111-2.132-0.5542.0850.127-4.313-0.918-0.198-1.667-4.313
17-4.313-4.313-3.0270.216-3.027-2.482-2.1322.534-4.313-4.313-2.4820.443-4.313-4.313-3.027-2.482
18-4.313-4.313-3.027-4.313-4.313-4.313-2.482-4.313-4.313-2.482-1.667-4.313-2.482-1.8732.684-0.495
19-4.313-3.027-4.313-3.027-3.027-1.873-4.313-3.027-0.1982.0980.7171.372-4.313-0.756-3.027-2.132
20-2.132-1.873-0.495-4.3131.1870.946-0.2880.799-4.313-0.077-0.495-0.554-1.3510.1270.889-1.111