Model info
| Transcription factor | Tfe3 | ||||||||
| Model | TFE3_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dGTCACGTGA | ||||||||
| Best auROC (human) | 0.483 | ||||||||
| Best auROC (mouse) | 1.0 | ||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | 30 | ||||||||
| Aligned words | 478 | ||||||||
| TF family | bHLH-ZIP factors {1.2.6} | ||||||||
| TF subfamily | TFE3-like factors {1.2.6.1} | ||||||||
| MGI | MGI:98511 | ||||||||
| EntrezGene | GeneID:209446 (SSTAR profile) | ||||||||
| UniProt ID | TFE3_MOUSE | ||||||||
| UniProt AC | Q64092 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Tfe3 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 149.0 | 20.0 | 226.0 | 72.0 |
| 02 | 62.0 | 5.0 | 396.0 | 4.0 |
| 03 | 10.0 | 13.0 | 20.0 | 424.0 |
| 04 | 8.0 | 443.0 | 13.0 | 3.0 |
| 05 | 449.0 | 5.0 | 9.0 | 4.0 |
| 06 | 7.0 | 436.0 | 7.0 | 17.0 |
| 07 | 71.0 | 9.0 | 380.0 | 7.0 |
| 08 | 8.0 | 14.0 | 17.0 | 428.0 |
| 09 | 6.0 | 1.0 | 454.0 | 6.0 |
| 10 | 375.0 | 21.0 | 57.0 | 14.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.241 | -1.703 | 0.654 | -0.475 |
| 02 | -0.621 | -2.896 | 1.212 | -3.062 |
| 03 | -2.328 | -2.096 | -1.703 | 1.28 |
| 04 | -2.518 | 1.324 | -2.096 | -3.261 |
| 05 | 1.337 | -2.896 | -2.418 | -3.062 |
| 06 | -2.629 | 1.308 | -2.629 | -1.853 |
| 07 | -0.489 | -2.418 | 1.171 | -2.629 |
| 08 | -2.518 | -2.03 | -1.853 | 1.29 |
| 09 | -2.753 | -3.842 | 1.348 | -2.753 |
| 10 | 1.158 | -1.658 | -0.703 | -2.03 |