We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTFEB
(GeneCards)
ModelTFEB_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensusdGTCACGTG
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words301
TF familybHLH-ZIP factors {1.2.6}
TF subfamilyTFE3-like factors {1.2.6.1}
HGNCHGNC:11753
EntrezGeneGeneID:7942
(SSTAR profile)
UniProt IDTFEB_HUMAN
UniProt ACP19484
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.68442
0.0005 1.308265
0.0001 4.99952
GTEx tissue expression atlas TFEB expression
ReMap ChIP-seq dataset list TFEB datasets
Motifs in JASPAR
MA0692.1 (TFEB; Homo sapiens)
PCM
ACGT
0194.7328.777116.08639.38
0273.2880.0185.6860.0
030.00.00.0258.974
040.0258.9740.00.0
05258.9740.00.00.0
060.0258.9740.00.0
070.00.0258.9740.0
080.00.00.0258.974
092.2562.256252.2072.256
PWM
ACGT
010.374-1.8730.575-0.484
020.122-3.8631.04-3.863
03-3.863-3.863-3.8631.37
04-3.8631.37-3.863-3.863
051.37-3.863-3.863-3.863
06-3.8631.37-3.863-3.863
07-3.863-3.8631.37-3.863
08-3.863-3.863-3.8631.37
09-2.898-2.8981.344-2.898