Model info
| Transcription factor | Tfeb | ||||||||
| Model | TFEB_MOUSE.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 9 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dGTCACGTG | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 301 | ||||||||
| TF family | bHLH-ZIP factors {1.2.6} | ||||||||
| TF subfamily | TFE3-like factors {1.2.6.1} | ||||||||
| MGI | MGI:103270 | ||||||||
| EntrezGene | GeneID:21425 (SSTAR profile) | ||||||||
| UniProt ID | TFEB_MOUSE | ||||||||
| UniProt AC | Q9R210 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Tfeb expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 94.732 | 8.777 | 116.086 | 39.38 |
| 02 | 73.288 | 0.0 | 185.686 | 0.0 |
| 03 | 0.0 | 0.0 | 0.0 | 258.974 |
| 04 | 0.0 | 258.974 | 0.0 | 0.0 |
| 05 | 258.974 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 258.974 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 258.974 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 258.974 |
| 09 | 2.256 | 2.256 | 252.207 | 2.256 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.374 | -1.873 | 0.575 | -0.484 |
| 02 | 0.122 | -3.863 | 1.04 | -3.863 |
| 03 | -3.863 | -3.863 | -3.863 | 1.37 |
| 04 | -3.863 | 1.37 | -3.863 | -3.863 |
| 05 | 1.37 | -3.863 | -3.863 | -3.863 |
| 06 | -3.863 | 1.37 | -3.863 | -3.863 |
| 07 | -3.863 | -3.863 | 1.37 | -3.863 |
| 08 | -3.863 | -3.863 | -3.863 | 1.37 |
| 09 | -2.898 | -2.898 | 1.344 | -2.898 |