Transcription factor | Thap11 | ||||||||
Model | THA11_MOUSE.H11MO.0.B | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 22 | ||||||||
Quality | B | ||||||||
Motif rank | 0 | ||||||||
Consensus | KGSMTbYTGGGAvdTGTAGTYY | ||||||||
Best auROC (human) | 0.942 | ||||||||
Best auROC (mouse) | 0.784 | ||||||||
Peak sets in benchmark (human) | 2 | ||||||||
Peak sets in benchmark (mouse) | 2 | ||||||||
Aligned words | 128 | ||||||||
TF family | THAP-related factors {2.9.1} | ||||||||
TF subfamily | THAP11 (HRIHFB2206) {2.9.1.0.11} | ||||||||
MGI | MGI:1930964 | ||||||||
EntrezGene | GeneID:59016 (SSTAR profile) | ||||||||
UniProt ID | THA11_MOUSE | ||||||||
UniProt AC | Q9JJD0 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Thap11 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 18.0 | 4.0 | 62.0 | 44.0 |
02 | 2.0 | 6.0 | 105.0 | 15.0 |
03 | 12.0 | 94.0 | 17.0 | 5.0 |
04 | 64.0 | 44.0 | 3.0 | 17.0 |
05 | 4.0 | 21.0 | 1.0 | 102.0 |
06 | 5.0 | 30.0 | 48.0 | 45.0 |
07 | 5.0 | 101.0 | 10.0 | 12.0 |
08 | 9.0 | 19.0 | 1.0 | 99.0 |
09 | 1.0 | 2.0 | 120.0 | 5.0 |
10 | 1.0 | 0.0 | 120.0 | 7.0 |
11 | 9.0 | 3.0 | 113.0 | 3.0 |
12 | 107.0 | 4.0 | 11.0 | 6.0 |
13 | 49.0 | 16.0 | 50.0 | 13.0 |
14 | 34.0 | 12.0 | 15.0 | 67.0 |
15 | 6.0 | 13.0 | 4.0 | 105.0 |
16 | 0.0 | 0.0 | 121.0 | 7.0 |
17 | 4.0 | 3.0 | 12.0 | 109.0 |
18 | 111.0 | 4.0 | 10.0 | 3.0 |
19 | 2.0 | 1.0 | 124.0 | 1.0 |
20 | 1.0 | 1.0 | 9.0 | 117.0 |
21 | 5.0 | 52.0 | 5.0 | 66.0 |
22 | 5.0 | 70.0 | 8.0 | 45.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -0.547 | -1.852 | 0.644 | 0.308 |
02 | -2.336 | -1.527 | 1.163 | -0.717 |
03 | -0.922 | 1.053 | -0.601 | -1.676 |
04 | 0.675 | 0.308 | -2.065 | -0.601 |
05 | -1.852 | -0.402 | -2.709 | 1.134 |
06 | -1.676 | -0.062 | 0.393 | 0.33 |
07 | -1.676 | 1.124 | -1.086 | -0.922 |
08 | -1.179 | -0.497 | -2.709 | 1.104 |
09 | -2.709 | -2.336 | 1.295 | -1.676 |
10 | -2.709 | -3.31 | 1.295 | -1.397 |
11 | -1.179 | -2.065 | 1.235 | -2.065 |
12 | 1.181 | -1.852 | -1.0 | -1.527 |
13 | 0.413 | -0.657 | 0.433 | -0.849 |
14 | 0.058 | -0.922 | -0.717 | 0.72 |
15 | -1.527 | -0.849 | -1.852 | 1.163 |
16 | -3.31 | -3.31 | 1.303 | -1.397 |
17 | -1.852 | -2.065 | -0.922 | 1.199 |
18 | 1.217 | -1.852 | -1.086 | -2.065 |
19 | -2.336 | -2.709 | 1.327 | -2.709 |
20 | -2.709 | -2.709 | -1.179 | 1.27 |
21 | -1.676 | 0.471 | -1.676 | 0.705 |
22 | -1.676 | 0.763 | -1.282 | 0.33 |