We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTHAP1
(GeneCards)
ModelTHAP1_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length25
Quality
C
Motif rank
0
ConsensusnKvvGCCRbvKbdvnbvhKRRvRvn
Best auROC (human)0.963
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words500
TF familyTHAP-related factors {2.9.1}
TF subfamilyTHAP1 {2.9.1.0.1}
HGNCHGNC:20856
EntrezGeneGeneID:55145
(SSTAR profile)
UniProt IDTHAP1_HUMAN
UniProt ACQ9NVV9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.715310000000001
0.0005 8.375810000000001
0.0001 11.954260000000001
GTEx tissue expression atlas THAP1 expression
ReMap ChIP-seq dataset list THAP1 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
017.01.062.07.017.010.0120.018.014.011.0132.07.02.07.076.09.0
025.014.018.03.01.018.09.01.041.0215.092.042.04.029.07.01.0
0316.021.08.06.074.0114.058.030.035.042.026.023.06.025.011.05.0
043.08.0117.03.011.013.0157.021.06.05.085.07.06.06.047.05.0
054.017.02.03.09.018.03.02.024.0348.05.029.06.025.02.03.0
063.030.04.06.010.0347.07.044.02.05.00.05.03.022.01.011.0
074.00.013.01.0283.039.059.023.04.00.07.01.09.05.051.01.0
0819.045.026.0210.08.07.05.024.014.041.027.048.03.010.04.09.0
098.016.010.010.015.044.028.016.025.024.09.04.032.0131.097.031.0
108.03.036.033.06.013.044.0152.021.09.050.064.02.03.016.040.0
113.018.08.08.05.03.03.017.033.065.015.033.06.074.030.0179.0
1211.03.030.03.036.045.039.040.04.04.027.021.029.026.097.085.0
1335.011.027.07.021.017.033.07.058.026.096.013.038.027.071.013.0
1430.070.035.017.021.022.08.030.074.059.028.066.010.014.04.012.0
1530.017.054.034.013.042.033.077.05.010.024.036.020.016.028.061.0
1617.018.027.06.026.028.026.05.051.032.046.010.046.041.094.027.0
1766.031.019.024.029.069.04.017.071.062.018.042.010.015.05.018.0
186.09.0130.031.05.04.0112.056.01.011.025.09.03.07.079.012.0
195.01.09.00.06.04.020.01.043.022.0272.09.06.012.088.02.0
207.012.028.013.05.011.016.07.057.040.0279.013.02.03.06.01.0
2122.024.015.010.09.042.010.05.044.0222.035.028.09.012.06.07.0
2242.08.029.05.0180.029.078.013.034.07.021.04.018.06.022.04.0
2395.043.0116.020.015.018.013.04.028.041.072.09.03.04.014.05.0
2440.029.057.015.017.040.036.013.073.064.047.031.04.07.019.08.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.454-3.1260.679-1.454-0.599-1.1141.336-0.543-0.788-1.0221.431-1.454-2.584-1.4540.881-1.215
02-1.77-0.788-0.543-2.234-3.126-0.543-1.215-3.1260.2691.9181.0720.293-1.975-0.074-1.454-3.126
03-0.658-0.392-1.328-1.60.8551.2850.613-0.040.1120.293-0.181-0.302-1.6-0.22-1.022-1.77
04-2.234-1.3281.311-2.234-1.022-0.861.604-0.392-1.6-1.770.993-1.454-1.6-1.60.404-1.77
05-1.975-0.599-2.584-2.234-1.215-0.543-2.234-2.584-0.262.399-1.77-0.074-1.6-0.22-2.584-2.234
06-2.234-0.04-1.975-1.6-1.1142.396-1.4540.339-2.584-1.77-4.4-1.77-2.234-0.346-3.126-1.022
07-1.975-4.4-0.86-3.1262.1920.2190.63-0.302-1.975-4.4-1.454-3.126-1.215-1.770.485-3.126
08-0.490.361-0.1811.895-1.328-1.454-1.77-0.26-0.7880.269-0.1440.425-2.234-1.114-1.975-1.215
09-1.328-0.658-1.114-1.114-0.7210.339-0.108-0.658-0.22-0.26-1.215-1.9750.0231.4241.124-0.008
10-1.328-2.2340.140.054-1.6-0.860.3391.572-0.392-1.2150.4650.711-2.584-2.234-0.6580.244
11-2.234-0.543-1.328-1.328-1.77-2.234-2.234-0.5990.0540.726-0.7210.054-1.60.855-0.041.735
12-1.022-2.234-0.04-2.2340.140.3610.2190.244-1.975-1.975-0.144-0.392-0.074-0.1811.1240.993
130.112-1.022-0.144-1.454-0.392-0.5990.054-1.4540.613-0.1811.114-0.860.193-0.1440.814-0.86
14-0.040.80.112-0.599-0.392-0.346-1.328-0.040.8550.63-0.1080.741-1.114-0.788-1.975-0.938
15-0.04-0.5990.5420.083-0.860.2930.0540.894-1.77-1.114-0.260.14-0.439-0.658-0.1080.663
16-0.599-0.543-0.144-1.6-0.181-0.108-0.181-1.770.4850.0230.383-1.1140.3830.2691.093-0.144
170.741-0.008-0.49-0.26-0.0740.785-1.975-0.5990.8140.679-0.5430.293-1.114-0.721-1.77-0.543
18-1.6-1.2151.416-0.008-1.77-1.9751.2680.578-3.126-1.022-0.22-1.215-2.234-1.4540.92-0.938
19-1.77-3.126-1.215-4.4-1.6-1.975-0.439-3.1260.316-0.3462.153-1.215-1.6-0.9381.027-2.584
20-1.454-0.938-0.108-0.86-1.77-1.022-0.658-1.4540.5950.2442.178-0.86-2.584-2.234-1.6-3.126
21-0.346-0.26-0.721-1.114-1.2150.293-1.114-1.770.3391.950.112-0.108-1.215-0.938-1.6-1.454
220.293-1.328-0.074-1.771.741-0.0740.907-0.860.083-1.454-0.392-1.975-0.543-1.6-0.346-1.975
231.1040.3161.303-0.439-0.721-0.543-0.86-1.975-0.1080.2690.828-1.215-2.234-1.975-0.788-1.77
240.244-0.0740.595-0.721-0.5990.2440.14-0.860.8410.7110.404-0.008-1.975-1.454-0.49-1.328