Model info
| Transcription factor | THAP1 (GeneCards) | ||||||||
| Model | THAP1_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv10 | ||||||||
| Model length | 22 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vSSvKCCMYbKYbvnbbhKGSY | ||||||||
| Best auROC (human) | 0.977 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 498 | ||||||||
| TF family | THAP-related factors {2.9.1} | ||||||||
| TF subfamily | THAP1 {2.9.1.0.1} | ||||||||
| HGNC | HGNC:20856 | ||||||||
| EntrezGene | GeneID:55145 (SSTAR profile) | ||||||||
| UniProt ID | THAP1_HUMAN | ||||||||
| UniProt AC | Q9NVV9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | THAP1 expression | ||||||||
| ReMap ChIP-seq dataset list | THAP1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 69.049 | 222.412 | 161.478 | 45.388 |
| 02 | 30.622 | 69.562 | 369.77 | 28.372 |
| 03 | 30.79 | 336.434 | 93.047 | 38.055 |
| 04 | 75.428 | 290.838 | 88.844 | 43.217 |
| 05 | 33.156 | 39.6 | 366.812 | 58.758 |
| 06 | 8.242 | 455.999 | 27.267 | 6.817 |
| 07 | 17.817 | 452.859 | 20.52 | 7.13 |
| 08 | 298.524 | 90.762 | 69.959 | 39.082 |
| 09 | 9.318 | 113.149 | 88.216 | 287.642 |
| 10 | 29.513 | 262.173 | 149.732 | 56.908 |
| 11 | 19.664 | 90.988 | 104.095 | 283.578 |
| 12 | 12.449 | 179.981 | 24.611 | 281.285 |
| 13 | 51.418 | 92.768 | 251.069 | 103.071 |
| 14 | 80.751 | 117.903 | 264.936 | 34.737 |
| 15 | 91.819 | 196.121 | 114.33 | 96.057 |
| 16 | 56.407 | 122.832 | 87.614 | 231.473 |
| 17 | 59.185 | 169.619 | 170.883 | 98.639 |
| 18 | 87.446 | 249.123 | 55.831 | 105.926 |
| 19 | 11.401 | 64.292 | 341.197 | 81.436 |
| 20 | 12.369 | 74.138 | 394.011 | 17.808 |
| 21 | 9.055 | 96.948 | 371.033 | 21.29 |
| 22 | 35.936 | 392.301 | 33.586 | 36.504 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.58 | 0.574 | 0.257 | -0.988 |
| 02 | -1.366 | -0.573 | 1.08 | -1.439 |
| 03 | -1.361 | 0.986 | -0.288 | -1.158 |
| 04 | -0.494 | 0.841 | -0.333 | -1.036 |
| 05 | -1.29 | -1.12 | 1.072 | -0.738 |
| 06 | -2.555 | 1.289 | -1.476 | -2.713 |
| 07 | -1.874 | 1.282 | -1.743 | -2.676 |
| 08 | 0.867 | -0.312 | -0.567 | -1.133 |
| 09 | -2.451 | -0.095 | -0.34 | 0.83 |
| 10 | -1.401 | 0.738 | 0.182 | -0.769 |
| 11 | -1.783 | -0.31 | -0.177 | 0.816 |
| 12 | -2.198 | 0.364 | -1.573 | 0.808 |
| 13 | -0.868 | -0.291 | 0.695 | -0.187 |
| 14 | -0.427 | -0.054 | 0.748 | -1.246 |
| 15 | -0.301 | 0.449 | -0.085 | -0.256 |
| 16 | -0.778 | -0.014 | -0.347 | 0.614 |
| 17 | -0.731 | 0.305 | 0.313 | -0.23 |
| 18 | -0.349 | 0.687 | -0.788 | -0.16 |
| 19 | -2.276 | -0.65 | 1.0 | -0.419 |
| 20 | -2.204 | -0.511 | 1.143 | -1.874 |
| 21 | -2.476 | -0.247 | 1.083 | -1.709 |
| 22 | -1.213 | 1.139 | -1.278 | -1.198 |