We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTLX1
(GeneCards)
ModelTLX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
D
Motif rank
0
ConsensushYKKYAvbndvMYnRKd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words50
TF familyNK-related factors {3.1.2}
TF subfamilyTLX {3.1.2.21}
HGNCHGNC:5056
EntrezGeneGeneID:3195
(SSTAR profile)
UniProt IDTLX1_HUMAN
UniProt ACP31314
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.044309999999999
0.0005 5.6631599999999995
0.0001 6.9417100000000005
GTEx tissue expression atlas TLX1 expression
ReMap ChIP-seq dataset list TLX1 datasets
Motifs in JASPAR
PCM
ACGT
019.23621.1517.60512.008
021.63117.9462.53827.884
030.8161.63136.13211.42
047.3423.26330.3329.064
050.81627.8840.81620.484
0642.3341.3860.8165.465
0719.17717.6137.7455.465
085.21915.98216.14812.651
0913.787.09612.6416.484
1014.5174.97313.46717.043
118.1578.15733.6850.0
1211.4231.2380.07.342
132.44733.5950.013.958
1425.4376.6178.9738.973
1533.270.8168.7287.187
163.5885.21929.9411.254
1714.1266.62720.4188.828
PWM
ACGT
01-0.2770.496-0.451-0.037
02-1.6420.339-1.3440.761
03-2.017-1.6421.013-0.083
04-0.482-1.1560.843-0.294
05-2.0170.761-2.0170.465
061.167-1.741-2.017-0.738
070.4020.322-0.435-0.738
08-0.7770.230.240.011
090.091-0.5120.010.259
100.139-0.8170.0690.29
11-0.389-0.3890.945-2.623
12-0.0830.871-2.623-0.482
13-1.370.942-2.6230.103
140.673-0.574-0.303-0.303
150.933-2.017-0.328-0.501
16-1.083-0.7770.83-0.097
170.114-0.5720.462-0.318