We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorTwist1
ModelTWST1_MOUSE.H11DI.0.B
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
B
Motif rank
0
ConsensusnvCAKMTGKWWbbvATYWn
Best auROC (human)0.971
Best auROC (mouse)0.657
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)8
Aligned words415
TF familyTal-related factors {1.2.3}
TF subfamilyTwist-like factors {1.2.3.2}
MGIMGI:98872
EntrezGeneGeneID:22160
(SSTAR profile)
UniProt IDTWST1_MOUSE
UniProt ACP26687
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.401160000000001
0.0005 9.70411
0.0001 14.56831
GTEx tissue expression atlas Twist1 expression
Motifs in JASPAR
MA1123.1 (TWIST1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0154.038.026.03.084.027.09.05.040.027.020.09.021.027.017.06.0
0211.0179.09.00.04.0113.01.01.05.060.03.04.02.018.00.03.0
0319.01.02.00.0359.02.05.04.05.03.03.02.00.00.03.05.0
043.021.092.0267.01.00.00.05.00.01.02.010.00.03.01.07.0
050.04.00.00.011.011.02.01.028.062.05.00.047.0211.030.01.0
060.00.00.086.03.00.00.0285.00.02.00.035.00.00.00.02.0
070.01.02.00.00.00.00.02.00.00.00.00.00.00.0405.03.0
080.00.00.00.00.01.00.00.06.042.0246.0113.00.00.04.01.0
094.00.00.02.010.00.01.032.091.023.023.0113.06.04.06.098.0
1067.06.09.029.08.01.00.018.016.03.02.09.035.019.05.0186.0
1130.027.029.040.01.017.01.010.02.05.01.08.04.085.017.0136.0
125.06.04.022.09.044.05.076.01.017.04.026.09.060.031.094.0
1310.05.06.03.072.033.06.016.015.011.09.09.075.053.065.025.0
14149.014.05.04.096.01.01.04.065.05.07.09.042.00.010.01.0
153.02.09.0338.00.00.00.020.01.00.01.021.00.01.02.015.0
160.01.01.02.01.02.00.00.06.02.02.02.022.055.07.0310.0
1716.00.02.011.042.03.01.014.05.02.01.02.0229.09.010.066.0
1891.045.092.064.04.04.01.05.08.03.00.03.023.018.030.022.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.7310.3820.007-2.0491.170.044-1.027-1.5830.4330.044-0.251-1.027-0.2030.044-0.41-1.413
02-0.8341.924-1.027-4.242-1.7891.465-2.946-2.946-1.5830.835-2.049-1.789-2.4-0.354-4.242-2.049
03-0.301-2.946-2.4-4.2422.619-2.4-1.583-1.789-1.583-2.049-2.049-2.4-4.242-4.242-2.049-1.583
04-2.049-0.2031.2612.323-2.946-4.242-4.242-1.583-4.242-2.946-2.4-0.926-4.242-2.049-2.946-1.267
05-4.242-1.789-4.242-4.242-0.834-0.834-2.4-2.9460.080.868-1.583-4.2420.5932.0880.148-2.946
06-4.242-4.242-4.2421.193-2.049-4.242-4.2422.388-4.242-2.4-4.2420.301-4.242-4.242-4.242-2.4
07-4.242-2.946-2.4-4.242-4.242-4.242-4.242-2.4-4.242-4.242-4.242-4.242-4.242-4.2422.739-2.049
08-4.242-4.242-4.242-4.242-4.242-2.946-4.242-4.242-1.4130.4812.2421.465-4.242-4.242-1.789-2.946
09-1.789-4.242-4.242-2.4-0.926-4.242-2.9460.2121.25-0.114-0.1141.465-1.413-1.789-1.4131.323
100.945-1.413-1.0270.115-1.14-2.946-4.242-0.354-0.469-2.049-2.4-1.0270.301-0.301-1.5831.962
110.1480.0440.1150.433-2.946-0.41-2.946-0.926-2.4-1.583-2.946-1.14-1.7891.182-0.411.65
12-1.583-1.413-1.789-0.157-1.0270.527-1.5831.07-2.946-0.41-1.7890.007-1.0270.8350.1811.282
13-0.926-1.583-1.413-2.0491.0170.243-1.413-0.469-0.533-0.834-1.027-1.0271.0570.7120.915-0.032
141.741-0.6-1.583-1.7891.303-2.946-2.946-1.7890.915-1.583-1.267-1.0270.481-4.242-0.926-2.946
15-2.049-2.4-1.0272.559-4.242-4.242-4.242-0.251-2.946-4.242-2.946-0.203-4.242-2.946-2.4-0.533
16-4.242-2.946-2.946-2.4-2.946-2.4-4.242-4.242-1.413-2.4-2.4-2.4-0.1570.749-1.2672.472
17-0.469-4.242-2.4-0.8340.481-2.049-2.946-0.6-1.583-2.4-2.946-2.42.17-1.027-0.9260.93
181.250.551.2610.899-1.789-1.789-2.946-1.583-1.14-2.049-4.242-2.049-0.114-0.3540.148-0.157