We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorYY1
(GeneCards)
ModelTYY1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusMAARATGGCKSM
Best auROC (human)0.981
Best auROC (mouse)0.989
Peak sets in benchmark (human)69
Peak sets in benchmark (mouse)72
Aligned words453
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyYY1-like factors {2.3.3.9}
HGNCHGNC:12856
EntrezGeneGeneID:7528
(SSTAR profile)
UniProt IDTYY1_HUMAN
UniProt ACP25490
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.269565
0.0005 3.5155199999999995
0.0001 6.253394999999999
GTEx tissue expression atlas YY1 expression
ReMap ChIP-seq dataset list YY1 datasets
Motifs in JASPAR
MA0095.1 (YY1; Homo sapiens)
MA0095.2 (YY1; Homo sapiens)
PCM
ACGT
0195.0288.042.028.0
02439.00.014.00.0
03434.07.05.07.0
04135.047.0249.022.0
05451.00.01.01.0
060.01.03.0449.0
070.00.0453.00.0
085.00.0444.04.0
0911.0439.00.03.0
1014.058.0321.060.0
1148.054.0318.033.0
1258.0337.023.035.0
PWM
ACGT
01-0.1730.925-0.97-1.358
021.345-4.318-2.0-4.318
031.334-2.6-2.867-2.6
040.174-0.8610.781-1.585
051.372-4.318-3.815-3.815
06-4.318-3.815-3.2331.367
07-4.318-4.3181.376-4.318
08-2.867-4.3181.356-3.033
09-2.2151.345-4.318-3.233
10-2.0-0.6571.033-0.624
11-0.84-0.7261.024-1.201
12-0.6571.082-1.543-1.145