We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorYy1
ModelTYY1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusvAAvATGGCSSM
Best auROC (human)0.984
Best auROC (mouse)0.993
Peak sets in benchmark (human)69
Peak sets in benchmark (mouse)72
Aligned words500
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyYY1-like factors {2.3.3.9}
MGIMGI:99150
EntrezGeneGeneID:22632
(SSTAR profile)
UniProt IDTYY1_MOUSE
UniProt ACQ00899
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.9962150000000003
0.0005 4.116675
0.0001 6.51293
GTEx tissue expression atlas Yy1 expression
Motifs in JASPAR
MA0095.1 (YY1; Homo sapiens)
MA0095.2 (YY1; Homo sapiens)
PCM
ACGT
0189.0285.066.060.0
02420.08.066.06.0
03421.018.018.043.0
04176.0106.0205.013.0
05497.02.00.01.0
062.01.02.0495.0
073.00.0496.01.0
082.01.0495.02.0
0920.0460.03.017.0
1015.082.0340.063.0
1140.053.0376.031.0
1268.0364.031.037.0
PWM
ACGT
01-0.3350.817-0.628-0.721
021.203-2.584-0.628-2.819
031.206-1.868-1.868-1.044
040.339-0.1630.49-2.163
051.371-3.573-4.4-3.903
06-3.573-3.903-3.5731.367
07-3.325-4.41.369-3.903
08-3.573-3.9031.367-3.573
09-1.771.294-3.325-1.92
10-2.034-0.4150.993-0.673
11-1.114-0.8411.093-1.358
12-0.5991.061-1.358-1.189