We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorUSF1
(GeneCards)
ModelUSF1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusvvbnvvnbbnvGTCACGTGvbbn
Best auROC (human)0.999
Best auROC (mouse)0.985
Peak sets in benchmark (human)59
Peak sets in benchmark (mouse)7
Aligned words500
TF familybHLH-ZIP factors {1.2.6}
TF subfamilyUSF factors {1.2.6.2}
HGNCHGNC:12593
EntrezGeneGeneID:7391
(SSTAR profile)
UniProt IDUSF1_HUMAN
UniProt ACP22415
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.09119
0.0005 2.5201599999999997
0.0001 8.13821
GTEx tissue expression atlas USF1 expression
ReMap ChIP-seq dataset list USF1 datasets
Motifs in JASPAR
MA0093.1 (USF1; Homo sapiens)
MA0093.2 (USF1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.86217.63143.7614.56112.59647.0944.83413.00222.39677.384105.66124.7958.96220.65231.8156.998
026.38622.26727.0846.0828.36670.5736.90526.91628.099110.20155.43232.3393.73418.4123.3333.878
0311.5417.66433.3933.98746.14976.43858.87739.98325.28148.95952.92815.5869.85720.73821.4217.198
0419.80418.6549.0295.34551.67653.35436.82821.94130.68851.96371.49812.4699.60323.02927.5416.584
0521.86621.24362.8725.7932.4151.14535.29228.14844.23757.60566.02617.0275.80314.5922.05213.893
0633.47422.92934.90813.00621.25653.62740.62929.0740.84869.09857.01419.2835.01927.20711.45521.177
0724.62937.60526.63611.72715.63366.67451.26739.28711.80671.52845.39215.28113.08324.82328.85515.774
0810.85121.19622.54310.56136.7679.72737.40646.73726.66666.61642.88415.9844.7834.48629.60313.199
0911.0925.19931.44911.3245.31446.40577.86532.44222.45732.18145.96831.8319.20413.25842.17721.842
1024.3226.29656.3541.09141.9923.46540.4311.15837.22244.177101.04915.01221.6828.6558.468.643
1112.9990.0112.2170.015.1413.85762.4621.12820.7113.753231.8280.00.00.035.9030.0
120.07.322.94638.5851.171.5680.04.8730.80110.3997.747423.4630.00.01.1280.0
130.01.9710.00.00.019.2860.00.00.011.8220.00.00.0466.0910.8310.0
140.00.00.00.0496.7121.6260.8310.00.00.00.00.8310.00.00.00.0
150.0470.5255.14921.0390.00.7270.00.8990.00.8310.00.00.00.00.00.831
160.00.00.00.092.5547.362372.1660.00.00.8084.3410.03.7660.019.0030.0
170.01.0340.095.2850.01.3110.06.8591.7781.8310.0391.9010.00.00.00.0
180.00.7880.9910.00.00.04.1760.00.00.00.00.00.00.995493.0510.0
190.00.00.00.00.9950.00.7880.0166.82486.566209.73335.0960.00.00.00.0
207.36782.34734.14543.9593.22753.28514.11615.9379.67693.98366.70540.1570.9420.2266.2727.657
210.08.92712.2830.026.454161.66332.28729.43711.29767.86532.519.5667.28340.36648.93611.125
229.7537.6421.5166.12689.46179.66661.79747.89815.43945.84254.09510.647.93111.1424.7276.331
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.55-0.5630.333-1.855-0.8910.4060.357-0.86-0.3280.8991.21-0.228-1.219-0.4080.018-1.455
02-1.541-0.334-0.141-1.587-0.0960.8080.164-0.147-0.1051.2510.5680.034-2.038-0.521-0.288-2.004
03-0.975-0.5610.066-1.9780.3860.8870.6280.244-0.2090.4450.522-0.683-1.128-0.404-0.372-0.587
04-0.449-0.5080.446-1.7080.4980.530.162-0.348-0.0180.5040.821-0.9-1.153-0.301-0.125-0.623
05-0.352-0.380.693-1.6330.0360.4880.12-0.1030.3440.6060.742-0.597-1.631-0.748-0.343-0.795
060.068-0.3050.109-0.86-0.380.5350.26-0.0710.2650.7870.596-0.475-1.767-0.137-0.983-0.383
07-0.2350.183-0.158-0.96-0.680.7510.490.226-0.9530.8210.369-0.703-0.854-0.227-0.079-0.672
08-1.035-0.382-0.322-1.0610.1610.9290.1780.398-0.1570.750.313-0.659-1.8120.097-0.053-0.845
09-1.014-0.2120.006-0.9940.3680.3910.9060.037-0.3260.0290.3820.018-1.193-0.8410.297-0.353
10-0.247-1.5550.584-3.0630.292-0.2820.255-1.0080.1730.3431.165-0.72-0.36-1.2530.621-1.254
11-0.86-4.41.27-4.4-0.712-2.0090.686-3.038-0.405-2.0331.993-4.4-4.4-4.40.137-4.4
12-4.4-1.412-2.250.209-3.011-2.783-4.4-1.794-3.281-1.076-1.3582.595-4.4-4.4-3.038-4.4
13-4.4-2.596-4.4-4.4-4.4-0.475-4.4-4.4-4.4-0.952-4.4-4.4-4.42.691-3.256-4.4
14-4.4-4.4-4.4-4.42.754-2.754-3.256-4.4-4.4-4.4-4.4-3.256-4.4-4.4-4.4-4.4
15-4.42.7-1.743-0.39-4.4-3.345-4.4-3.202-4.4-3.256-4.4-4.4-4.4-4.4-4.4-3.256
16-4.4-4.4-4.4-4.41.078-1.4072.466-4.4-4.4-3.275-1.901-4.4-2.03-4.4-0.49-4.4
17-4.4-3.102-4.41.107-4.4-2.924-4.4-1.474-2.681-2.657-4.42.518-4.4-4.4-4.4-4.4
18-4.4-3.292-3.133-4.4-4.4-4.4-1.936-4.4-4.4-4.4-4.4-4.4-4.4-3.132.747-4.4
19-4.4-4.4-4.4-4.4-3.13-4.4-3.292-4.41.6651.0111.8930.115-4.4-4.4-4.4-4.4
20-1.4060.9610.0880.338-2.1690.529-0.78-0.662-1.1451.0930.7520.248-3.17-0.428-1.558-1.369
21-4.4-1.223-0.915-4.4-0.1641.6340.032-0.059-0.9960.7690.039-1.156-1.4170.2530.444-1.011
22-1.138-1.371-0.368-1.581.0440.9280.6760.423-0.6930.3790.544-1.054-1.336-1.01-0.231-1.549