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Model info
Transcription factorUSF1
(GeneCards)
ModelUSF1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusvvbnvvnbbnvGTCACGTGvbbn
Best auROC (human)0.999
Best auROC (mouse)0.985
Peak sets in benchmark (human)59
Peak sets in benchmark (mouse)7
Aligned words500
TF familybHLH-ZIP factors {1.2.6}
TF subfamilyUSF factors {1.2.6.2}
HGNCHGNC:12593
EntrezGeneGeneID:7391
(SSTAR profile)
UniProt IDUSF1_HUMAN
UniProt ACP22415
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.09119
0.0005 2.5201599999999997
0.0001 8.13821
GTEx tissue expression atlas USF1 expression
ReMap ChIP-seq dataset list USF1 datasets
Motifs in JASPAR
MA0093.1 (USF1; Homo sapiens)
MA0093.2 (USF1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.86217.63143.7614.56112.59647.0944.83413.00222.39677.384105.66124.7958.96220.65231.8156.998
026.38622.26727.0846.0828.36670.5736.90526.91628.099110.20155.43232.3393.73418.4123.3333.878
0311.5417.66433.3933.98746.14976.43858.87739.98325.28148.95952.92815.5869.85720.73821.4217.198
0419.80418.6549.0295.34551.67653.35436.82821.94130.68851.96371.49812.4699.60323.02927.5416.584
0521.86621.24362.8725.7932.4151.14535.29228.14844.23757.60566.02617.0275.80314.5922.05213.893
0633.47422.92934.90813.00621.25653.62740.62929.0740.84869.09857.01419.2835.01927.20711.45521.177
0724.62937.60526.63611.72715.63366.67451.26739.28711.80671.52845.39215.28113.08324.82328.85515.774
0810.85121.19622.54310.56136.7679.72737.40646.73726.66666.61642.88415.9844.7834.48629.60313.199
0911.0925.19931.44911.3245.31446.40577.86532.44222.45732.18145.96831.8319.20413.25842.17721.842
1024.3226.29656.3541.09141.9923.46540.4311.15837.22244.177101.04915.01221.6828.6558.468.643
1112.9990.0112.2170.015.1413.85762.4621.12820.7113.753231.8280.00.00.035.9030.0
120.07.322.94638.5851.171.5680.04.8730.80110.3997.747423.4630.00.01.1280.0
130.01.9710.00.00.019.2860.00.00.011.8220.00.00.0466.0910.8310.0
140.00.00.00.0496.7121.6260.8310.00.00.00.00.8310.00.00.00.0
150.0470.5255.14921.0390.00.7270.00.8990.00.8310.00.00.00.00.00.831
160.00.00.00.092.5547.362372.1660.00.00.8084.3410.03.7660.019.0030.0
170.01.0340.095.2850.01.3110.06.8591.7781.8310.0391.9010.00.00.00.0
180.00.7880.9910.00.00.04.1760.00.00.00.00.00.00.995493.0510.0
190.00.00.00.00.9950.00.7880.0166.82486.566209.73335.0960.00.00.00.0
207.36782.34734.14543.9593.22753.28514.11615.9379.67693.98366.70540.1570.9420.2266.2727.657
210.08.92712.2830.026.454161.66332.28729.43711.29767.86532.519.5667.28340.36648.93611.125
229.7537.6421.5166.12689.46179.66661.79747.89815.43945.84254.09510.647.93111.1424.7276.331
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.55-0.5630.333-1.855-0.8910.4060.357-0.86-0.3280.8991.21-0.228-1.219-0.4080.018-1.455
02-1.541-0.334-0.141-1.587-0.0960.8080.164-0.147-0.1051.2510.5680.034-2.038-0.521-0.288-2.004
03-0.975-0.5610.066-1.9780.3860.8870.6280.244-0.2090.4450.522-0.683-1.128-0.404-0.372-0.587
04-0.449-0.5080.446-1.7080.4980.530.162-0.348-0.0180.5040.821-0.9-1.153-0.301-0.125-0.623
05-0.352-0.380.693-1.6330.0360.4880.12-0.1030.3440.6060.742-0.597-1.631-0.748-0.343-0.795
060.068-0.3050.109-0.86-0.380.5350.26-0.0710.2650.7870.596-0.475-1.767-0.137-0.983-0.383
07-0.2350.183-0.158-0.96-0.680.7510.490.226-0.9530.8210.369-0.703-0.854-0.227-0.079-0.672
08-1.035-0.382-0.322-1.0610.1610.9290.1780.398-0.1570.750.313-0.659-1.8120.097-0.053-0.845
09-1.014-0.2120.006-0.9940.3680.3910.9060.037-0.3260.0290.3820.018-1.193-0.8410.297-0.353
10-0.247-1.5550.584-3.0630.292-0.2820.255-1.0080.1730.3431.165-0.72-0.36-1.2530.621-1.254
11-0.86-4.41.27-4.4-0.712-2.0090.686-3.038-0.405-2.0331.993-4.4-4.4-4.40.137-4.4
12-4.4-1.412-2.250.209-3.011-2.783-4.4-1.794-3.281-1.076-1.3582.595-4.4-4.4-3.038-4.4
13-4.4-2.596-4.4-4.4-4.4-0.475-4.4-4.4-4.4-0.952-4.4-4.4-4.42.691-3.256-4.4
14-4.4-4.4-4.4-4.42.754-2.754-3.256-4.4-4.4-4.4-4.4-3.256-4.4-4.4-4.4-4.4
15-4.42.7-1.743-0.39-4.4-3.345-4.4-3.202-4.4-3.256-4.4-4.4-4.4-4.4-4.4-3.256
16-4.4-4.4-4.4-4.41.078-1.4072.466-4.4-4.4-3.275-1.901-4.4-2.03-4.4-0.49-4.4
17-4.4-3.102-4.41.107-4.4-2.924-4.4-1.474-2.681-2.657-4.42.518-4.4-4.4-4.4-4.4
18-4.4-3.292-3.133-4.4-4.4-4.4-1.936-4.4-4.4-4.4-4.4-4.4-4.4-3.132.747-4.4
19-4.4-4.4-4.4-4.4-3.13-4.4-3.292-4.41.6651.0111.8930.115-4.4-4.4-4.4-4.4
20-1.4060.9610.0880.338-2.1690.529-0.78-0.662-1.1451.0930.7520.248-3.17-0.428-1.558-1.369
21-4.4-1.223-0.915-4.4-0.1641.6340.032-0.059-0.9960.7690.039-1.156-1.4170.2530.444-1.011
22-1.138-1.371-0.368-1.581.0440.9280.6760.423-0.6930.3790.544-1.054-1.336-1.01-0.231-1.549