We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorUSF2
(GeneCards)
ModelUSF2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusndGTCACGTGvbbnvnnbnvnbb
Best auROC (human)0.998
Best auROC (mouse)0.999
Peak sets in benchmark (human)23
Peak sets in benchmark (mouse)10
Aligned words517
TF familybHLH-ZIP factors {1.2.6}
TF subfamilyUSF factors {1.2.6.2}
HGNCHGNC:12594
EntrezGeneGeneID:7392
(SSTAR profile)
UniProt IDUSF2_HUMAN
UniProt ACQ15853
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.59701
0.0005 3.16026
0.0001 8.733810000000002
GTEx tissue expression atlas USF2 expression
ReMap ChIP-seq dataset list USF2 datasets
Motifs in JASPAR
MA0526.1 (USF2; Homo sapiens)
MA0526.2 (USF2; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0120.0327.90171.45614.16336.19820.40339.67132.52352.94711.47371.27922.14615.0845.68374.1014.94
0213.4991.108109.6530.09.2170.036.2430.051.2745.985199.2480.05.5640.97267.2360.0
033.5659.5533.25263.1840.02.9640.05.10110.89915.85211.069374.5590.00.00.00.0
040.014.4650.00.00.028.3690.00.00.014.3220.00.00.0442.8440.00.0
050.00.00.00.0497.6270.00.02.3730.00.00.00.00.00.00.00.0
060.0489.8020.7947.0310.00.00.00.00.00.00.00.00.02.3730.00.0
070.00.00.00.083.3576.48402.3380.00.00.7940.00.00.00.07.0310.0
080.00.00.083.3570.00.00.07.2741.8283.6362.916400.9890.00.00.00.0
090.00.01.8280.00.00.03.6360.00.00.02.9160.00.00.0491.620.0
100.00.00.00.00.00.00.00.0239.95644.129173.70442.2110.00.00.00.0
113.624136.37422.72377.2361.92812.8949.63319.67410.88751.79949.34261.6761.15322.3810.1168.562
122.8357.0897.6680.032.17398.28641.97651.01310.22644.82623.40313.35912.81965.7471.28217.305
135.35717.53926.8088.34967.37751.11952.63544.8120.41864.84541.30517.76110.94122.50932.16616.06
1420.12733.94435.57914.44440.26541.17438.64135.93125.9260.54158.2848.179.6235.04630.54911.766
1525.2212.18748.8339.69334.15762.28736.32937.93136.83655.4954.79215.9348.51629.89922.2629.634
1619.24726.348.36810.81347.08544.39540.5527.83339.95961.11535.2125.9316.55721.10637.1848.345
1716.78525.91554.64515.50328.79848.54837.65737.91325.32255.65858.99621.3372.92318.25142.3839.365
1810.69915.29137.24810.59130.21928.70538.2151.23932.04147.83876.85736.9447.38926.81328.4921.426
1916.2523.08528.92812.08525.73534.90136.11721.89325.11959.44975.67520.56210.99737.11554.0218.068
2022.91415.73431.9497.50541.39751.92429.6731.55931.95960.74479.44322.5947.36324.1133.3827.754
2110.72135.34245.30412.26528.90357.53136.07630.00225.95768.85553.96425.6679.9720.93428.9989.51
229.36431.03422.45712.69734.89467.78434.38545.616.87570.42953.96323.0755.22822.16232.49117.563
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.438-1.3390.82-0.7770.145-0.420.2360.0390.522-0.9810.818-0.339-0.715-1.6510.856-1.781
02-0.823-3.0511.246-4.4-1.192-4.40.147-4.40.49-1.6021.842-4.4-1.671-3.1470.76-4.4
03-2.08-1.158-2.1620.698-4.4-2.245-4.4-1.752-1.031-0.667-1.0162.472-4.4-4.4-4.4-4.4
04-4.4-0.756-4.4-4.4-4.4-0.095-4.4-4.4-4.4-0.766-4.4-4.4-4.42.64-4.4-4.4
05-4.4-4.4-4.4-4.42.756-4.4-4.4-2.439-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4
06-4.42.74-3.286-1.45-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.4-2.439-4.4-4.4
07-4.4-4.4-4.4-4.40.973-1.5282.544-4.4-4.4-3.286-4.4-4.4-4.4-4.4-1.45-4.4
08-4.4-4.4-4.40.973-4.4-4.4-4.4-1.418-2.659-2.062-2.2592.541-4.4-4.4-4.4-4.4
09-4.4-4.4-2.659-4.4-4.4-4.4-2.062-4.4-4.4-4.4-2.259-4.4-4.4-4.42.744-4.4
10-4.4-4.4-4.4-4.4-4.4-4.4-4.4-4.42.0280.3421.7050.297-4.4-4.4-4.4-4.4
11-2.0651.464-0.3140.898-2.614-0.868-1.15-0.456-1.0320.50.4520.674-3.022-0.329-1.103-1.263
12-2.284-1.442-1.368-4.40.0291.1370.2920.485-1.0920.357-0.285-0.834-0.8740.7370.818-0.581
13-1.706-0.568-0.151-1.2870.7620.4870.5160.357-0.4190.7240.276-0.556-1.027-0.3230.029-0.654
14-0.4330.0820.128-0.7580.2510.2730.210.138-0.1840.6550.618-1.307-1.1510.113-0.022-0.957
15-0.211-0.9230.442-1.1440.0880.6840.1490.1920.1630.5690.556-0.662-1.268-0.044-0.334-1.15
16-0.477-0.170.432-1.0380.4060.3470.258-0.1140.2430.6650.118-0.184-1.516-0.3870.172-1.287
17-0.611-0.1850.554-0.689-0.0810.4360.1840.191-0.2070.5720.63-0.376-2.257-0.5290.301-1.177
18-1.049-0.7020.174-1.058-0.033-0.0840.1990.490.0250.4220.8930.165-1.403-0.151-0.091-0.372
19-0.643-0.298-0.076-0.931-0.1920.1090.143-0.351-0.2150.6370.877-0.412-1.0220.170.542-0.539
20-0.306-0.6740.022-1.3880.2780.503-0.0510.010.0220.6590.926-0.32-1.407-0.2560.065-1.357
21-1.0470.1220.368-0.916-0.0770.6050.142-0.04-0.1830.7830.541-0.194-1.117-0.395-0.074-1.162
22-1.177-0.007-0.326-0.8830.1090.7680.0940.374-0.6060.8060.541-0.299-1.729-0.3390.038-0.567