Model info
| Transcription factor | VEZF1 (GeneCards) | ||||||||
| Model | VEZF1_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 22 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRRRRdRdRGGARRRRRvdRRR | ||||||||
| Best auROC (human) | 0.909 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 5 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | MAZ-like factors {2.3.4.8} | ||||||||
| HGNC | HGNC:12949 | ||||||||
| EntrezGene | GeneID:7716 (SSTAR profile) | ||||||||
| UniProt ID | VEZF1_HUMAN | ||||||||
| UniProt AC | Q14119 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | VEZF1 expression | ||||||||
| ReMap ChIP-seq dataset list | VEZF1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 115.0 | 44.0 | 272.0 | 69.0 |
| 02 | 106.0 | 54.0 | 318.0 | 22.0 |
| 03 | 148.0 | 31.0 | 274.0 | 47.0 |
| 04 | 153.0 | 38.0 | 272.0 | 37.0 |
| 05 | 253.0 | 44.0 | 175.0 | 28.0 |
| 06 | 171.0 | 30.0 | 250.0 | 49.0 |
| 07 | 97.0 | 56.0 | 322.0 | 25.0 |
| 08 | 132.0 | 56.0 | 249.0 | 63.0 |
| 09 | 148.0 | 32.0 | 292.0 | 28.0 |
| 10 | 29.0 | 6.0 | 430.0 | 35.0 |
| 11 | 9.0 | 59.0 | 415.0 | 17.0 |
| 12 | 411.0 | 43.0 | 6.0 | 40.0 |
| 13 | 124.0 | 13.0 | 352.0 | 11.0 |
| 14 | 103.0 | 40.0 | 335.0 | 22.0 |
| 15 | 137.0 | 23.0 | 292.0 | 48.0 |
| 16 | 105.0 | 16.0 | 323.0 | 56.0 |
| 17 | 75.0 | 62.0 | 336.0 | 27.0 |
| 18 | 232.0 | 91.0 | 136.0 | 41.0 |
| 19 | 106.0 | 49.0 | 284.0 | 61.0 |
| 20 | 191.0 | 11.0 | 271.0 | 27.0 |
| 21 | 154.0 | 33.0 | 279.0 | 34.0 |
| 22 | 168.0 | 21.0 | 262.0 | 49.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.082 | -1.022 | 0.771 | -0.584 |
| 02 | -0.163 | -0.823 | 0.926 | -1.681 |
| 03 | 0.167 | -1.358 | 0.778 | -0.958 |
| 04 | 0.2 | -1.163 | 0.771 | -1.189 |
| 05 | 0.699 | -1.022 | 0.333 | -1.454 |
| 06 | 0.31 | -1.389 | 0.687 | -0.918 |
| 07 | -0.25 | -0.788 | 0.939 | -1.561 |
| 08 | 0.054 | -0.788 | 0.683 | -0.673 |
| 09 | 0.167 | -1.328 | 0.841 | -1.454 |
| 10 | -1.421 | -2.819 | 1.227 | -1.242 |
| 11 | -2.484 | -0.737 | 1.191 | -1.92 |
| 12 | 1.182 | -1.044 | -2.819 | -1.114 |
| 13 | -0.008 | -2.163 | 1.027 | -2.311 |
| 14 | -0.191 | -1.114 | 0.978 | -1.681 |
| 15 | 0.091 | -1.64 | 0.841 | -0.938 |
| 16 | -0.172 | -1.975 | 0.942 | -0.788 |
| 17 | -0.503 | -0.689 | 0.981 | -1.489 |
| 18 | 0.613 | -0.313 | 0.083 | -1.09 |
| 19 | -0.163 | -0.918 | 0.814 | -0.705 |
| 20 | 0.42 | -2.311 | 0.767 | -1.489 |
| 21 | 0.206 | -1.298 | 0.796 | -1.27 |
| 22 | 0.293 | -1.725 | 0.734 | -0.918 |