Model info
| Transcription factor | VEZF1 (GeneCards) | ||||||||
| Model | VEZF1_HUMAN.H11MO.1.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | dvnRGGARRdRv | ||||||||
| Best auROC (human) | 0.87 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 5 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 489 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | MAZ-like factors {2.3.4.8} | ||||||||
| HGNC | HGNC:12949 | ||||||||
| EntrezGene | GeneID:7716 (SSTAR profile) | ||||||||
| UniProt ID | VEZF1_HUMAN | ||||||||
| UniProt AC | Q14119 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | VEZF1 expression | ||||||||
| ReMap ChIP-seq dataset list | VEZF1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 201.0 | 67.0 | 152.0 | 69.0 |
| 02 | 142.0 | 65.0 | 227.0 | 55.0 |
| 03 | 181.0 | 78.0 | 181.0 | 49.0 |
| 04 | 178.0 | 15.0 | 252.0 | 44.0 |
| 05 | 4.0 | 3.0 | 477.0 | 5.0 |
| 06 | 2.0 | 31.0 | 440.0 | 16.0 |
| 07 | 477.0 | 4.0 | 1.0 | 7.0 |
| 08 | 138.0 | 7.0 | 327.0 | 17.0 |
| 09 | 56.0 | 17.0 | 368.0 | 48.0 |
| 10 | 106.0 | 47.0 | 280.0 | 56.0 |
| 11 | 124.0 | 39.0 | 283.0 | 43.0 |
| 12 | 123.0 | 92.0 | 225.0 | 49.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.492 | -0.591 | 0.215 | -0.562 |
| 02 | 0.148 | -0.621 | 0.613 | -0.784 |
| 03 | 0.388 | -0.442 | 0.388 | -0.896 |
| 04 | 0.372 | -2.012 | 0.717 | -1.0 |
| 05 | -3.105 | -3.304 | 1.352 | -2.939 |
| 06 | -3.552 | -1.336 | 1.272 | -1.954 |
| 07 | 1.352 | -3.105 | -3.883 | -2.673 |
| 08 | 0.12 | -2.673 | 0.976 | -1.898 |
| 09 | -0.766 | -1.898 | 1.094 | -0.916 |
| 10 | -0.141 | -0.936 | 0.822 | -0.766 |
| 11 | 0.014 | -1.116 | 0.832 | -1.022 |
| 12 | 0.006 | -0.28 | 0.604 | -0.896 |