Model info
| Transcription factor | WT1 (GeneCards) | ||||||||
| Model | WT1_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 20 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvSnGRRGGAGGRRvvRRvR | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | 0.985 | ||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | 5 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:12796 | ||||||||
| EntrezGene | GeneID:7490 (SSTAR profile) | ||||||||
| UniProt ID | WT1_HUMAN | ||||||||
| UniProt AC | P19544 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | WT1 expression | ||||||||
| ReMap ChIP-seq dataset list | WT1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 156.0 | 51.0 | 257.0 | 36.0 |
| 02 | 105.0 | 80.0 | 280.0 | 35.0 |
| 03 | 44.0 | 56.0 | 381.0 | 19.0 |
| 04 | 137.0 | 152.0 | 138.0 | 73.0 |
| 05 | 49.0 | 42.0 | 402.0 | 7.0 |
| 06 | 145.0 | 26.0 | 298.0 | 31.0 |
| 07 | 126.0 | 13.0 | 357.0 | 4.0 |
| 08 | 3.0 | 13.0 | 478.0 | 6.0 |
| 09 | 6.0 | 8.0 | 486.0 | 0.0 |
| 10 | 413.0 | 74.0 | 2.0 | 11.0 |
| 11 | 6.0 | 4.0 | 485.0 | 5.0 |
| 12 | 18.0 | 6.0 | 454.0 | 22.0 |
| 13 | 238.0 | 50.0 | 193.0 | 19.0 |
| 14 | 119.0 | 18.0 | 357.0 | 6.0 |
| 15 | 121.0 | 93.0 | 258.0 | 28.0 |
| 16 | 153.0 | 107.0 | 194.0 | 46.0 |
| 17 | 60.0 | 34.0 | 376.0 | 30.0 |
| 18 | 97.0 | 47.0 | 337.0 | 19.0 |
| 19 | 185.0 | 54.0 | 236.0 | 25.0 |
| 20 | 107.0 | 40.0 | 340.0 | 13.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.219 | -0.879 | 0.714 | -1.215 |
| 02 | -0.172 | -0.439 | 0.8 | -1.242 |
| 03 | -1.022 | -0.788 | 1.106 | -1.818 |
| 04 | 0.091 | 0.193 | 0.098 | -0.529 |
| 05 | -0.918 | -1.067 | 1.16 | -2.694 |
| 06 | 0.147 | -1.525 | 0.862 | -1.358 |
| 07 | 0.008 | -2.163 | 1.041 | -3.126 |
| 08 | -3.325 | -2.163 | 1.332 | -2.819 |
| 09 | -2.819 | -2.584 | 1.349 | -4.4 |
| 10 | 1.187 | -0.516 | -3.573 | -2.311 |
| 11 | -2.819 | -3.126 | 1.347 | -2.961 |
| 12 | -1.868 | -2.819 | 1.281 | -1.681 |
| 13 | 0.638 | -0.898 | 0.43 | -1.818 |
| 14 | -0.049 | -1.868 | 1.041 | -2.819 |
| 15 | -0.032 | -0.291 | 0.718 | -1.454 |
| 16 | 0.2 | -0.153 | 0.435 | -0.979 |
| 17 | -0.721 | -1.27 | 1.093 | -1.389 |
| 18 | -0.25 | -0.958 | 0.984 | -1.818 |
| 19 | 0.388 | -0.823 | 0.63 | -1.561 |
| 20 | -0.153 | -1.114 | 0.993 | -2.163 |