Check the newest release v13
Model info
Transcription factorXBP1
(GeneCards)
ModelXBP1_HUMAN.H11DI.0.D
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
D
Motif rank
0
ConsensusnRvdSAYGTGKMn
Best auROC (human)0.792
Best auROC (mouse)
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)
Aligned words504
TF familyXBP-1-related factors {1.1.5}
TF subfamilyXBP-1 {1.1.5.0.1}
HGNCHGNC:12801
EntrezGeneGeneID:7494
(SSTAR profile)
UniProt IDXBP1_HUMAN
UniProt ACP17861
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.862960000000001
0.0005 8.431360000000002
0.0001 11.67782
GTEx tissue expression atlas XBP1 expression
ReMap ChIP-seq dataset list XBP1 datasets
Motifs in JASPAR
MA0844.1 (XBP1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.05.075.05.017.018.070.018.035.023.0108.010.09.07.072.011.0
0214.025.036.03.07.023.019.04.063.0140.0105.017.02.015.020.07.0
0324.09.028.025.021.017.059.0106.044.025.036.075.010.07.06.08.0
0420.014.060.05.012.013.025.08.04.06.0101.018.010.021.0175.08.0
0537.02.05.02.052.01.00.01.0317.01.029.014.035.00.03.01.0
0641.0342.020.038.00.01.00.03.00.032.00.05.02.015.00.01.0
075.00.038.00.04.04.0375.07.00.02.016.02.02.01.042.02.0
080.00.00.011.01.02.00.04.010.055.016.0390.01.02.01.07.0
091.00.010.01.05.02.049.03.01.01.014.01.011.04.0382.015.0
100.00.018.00.04.00.03.00.032.03.0344.076.03.01.010.06.0
113.030.03.03.01.02.01.00.055.0292.011.017.010.049.014.09.0
1217.019.025.08.098.0108.093.074.03.09.05.012.08.08.07.06.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.599-1.770.868-1.77-0.599-0.5430.8-0.5430.112-0.3021.231-1.114-1.215-1.4540.828-1.022
02-0.788-0.220.14-2.234-1.454-0.302-0.49-1.9750.6951.491.203-0.599-2.584-0.721-0.439-1.454
03-0.26-1.215-0.108-0.22-0.392-0.5990.631.2130.339-0.220.140.868-1.114-1.454-1.6-1.328
04-0.439-0.7880.646-1.77-0.938-0.86-0.22-1.328-1.975-1.61.165-0.543-1.114-0.3921.713-1.328
050.167-2.584-1.77-2.5840.504-3.126-4.4-3.1262.306-3.126-0.074-0.7880.112-4.4-2.234-3.126
060.2692.382-0.4390.193-4.4-3.126-4.4-2.234-4.40.023-4.4-1.77-2.584-0.721-4.4-3.126
07-1.77-4.40.193-4.4-1.975-1.9752.474-1.454-4.4-2.584-0.658-2.584-2.584-3.1260.293-2.584
08-4.4-4.4-4.4-1.022-3.126-2.584-4.4-1.975-1.1140.56-0.6582.513-3.126-2.584-3.126-1.454
09-3.126-4.4-1.114-3.126-1.77-2.5840.445-2.234-3.126-3.126-0.788-3.126-1.022-1.9752.492-0.721
10-4.4-4.4-0.543-4.4-1.975-4.4-2.234-4.40.023-2.2342.3870.881-2.234-3.126-1.114-1.6
11-2.234-0.04-2.234-2.234-3.126-2.584-3.126-4.40.562.224-1.022-0.599-1.1140.445-0.788-1.215
12-0.599-0.49-0.22-1.3281.1351.2311.0820.855-2.234-1.215-1.77-0.938-1.328-1.328-1.454-1.6