We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF354A
(GeneCards)
ModelZ354A_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length27
Quality
C
Motif rank
0
ConsensusRTTYMRWYCRWTTACATTTRRTGWdRW
Best auROC (human)0.86
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words335
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZNF354A-like factors {2.3.3.64}
HGNCHGNC:11628
EntrezGeneGeneID:6940
(SSTAR profile)
UniProt IDZ354A_HUMAN
UniProt ACO60765
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -5.77324
0.0005 -2.6442900000000003
0.0001 4.14116
GTEx tissue expression atlas ZNF354A expression
ReMap ChIP-seq dataset list ZNF354A datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
013.02.06.0165.02.01.00.08.03.03.00.095.02.01.04.014.0
021.00.01.08.00.00.01.06.02.00.01.07.02.08.08.0264.0
030.00.02.03.02.00.00.06.01.02.00.08.03.082.03.0197.0
044.01.01.00.06.077.00.01.03.00.02.00.0186.02.012.014.0
0533.01.0148.017.072.00.06.02.02.00.012.01.06.00.08.01.0
0610.05.04.094.01.00.00.00.083.012.017.062.04.01.05.011.0
077.068.07.016.00.011.00.07.03.018.00.05.08.062.05.092.0
080.018.00.00.01.0151.00.07.00.012.00.00.00.0119.00.01.0
090.00.01.00.0214.021.058.07.00.00.00.00.07.00.01.00.0
107.011.03.0200.014.00.00.07.051.02.01.06.00.01.00.06.0
110.00.014.058.00.01.00.013.00.00.00.04.02.00.00.0217.0
121.00.00.01.00.00.00.01.00.00.00.014.03.016.00.0273.0
134.00.00.00.016.00.00.00.00.00.00.00.0206.080.03.00.0
140.0179.03.044.00.080.00.00.00.00.00.03.00.00.00.00.0
150.00.00.00.0247.03.09.00.02.00.01.00.041.00.06.00.0
164.011.02.0273.00.00.00.03.00.00.00.016.00.00.00.00.0
170.02.00.02.00.00.00.011.00.00.00.02.00.03.06.0283.0
180.00.00.00.00.02.01.02.00.00.00.06.00.064.03.0231.0
190.00.00.00.012.016.038.00.03.00.01.00.0213.01.024.01.0
20154.04.040.030.017.00.00.00.056.00.02.05.00.00.00.01.0
2113.02.03.0209.00.00.00.04.02.00.01.039.00.00.00.036.0
220.00.014.01.02.00.00.00.00.00.03.01.029.01.0242.016.0
230.05.01.025.00.00.00.01.064.010.09.0176.00.017.00.01.0
244.00.00.060.016.016.00.00.07.00.03.00.0122.01.059.021.0
25131.03.012.03.016.00.00.01.047.00.010.05.017.00.044.020.0
2611.010.03.0187.01.00.00.02.038.02.00.026.01.019.01.08.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.768-2.121-1.1292.129-2.121-2.673-4.005-0.856-1.768-1.768-4.0051.579-2.121-2.673-1.507-0.315
02-2.673-4.005-2.673-0.856-4.005-4.005-2.673-1.129-2.121-4.005-2.673-0.983-2.121-0.856-0.8562.598
03-4.005-4.005-2.121-1.768-2.121-4.005-4.005-1.129-2.673-2.121-4.005-0.856-1.7681.432-1.7682.306
04-1.507-2.673-2.673-4.005-1.1291.369-4.005-2.673-1.768-4.005-2.121-4.0052.249-2.121-0.465-0.315
050.528-2.6732.02-0.1251.302-4.005-1.129-2.121-2.121-4.005-0.465-2.673-1.129-4.005-0.856-2.673
06-0.641-1.3-1.5071.568-2.673-4.005-4.005-4.0051.444-0.465-0.1251.154-1.507-2.673-1.3-0.549
07-0.9831.246-0.983-0.184-4.005-0.549-4.005-0.983-1.768-0.069-4.005-1.3-0.8561.154-1.31.547
08-4.005-0.069-4.005-4.005-2.6732.041-4.005-0.983-4.005-0.465-4.005-4.005-4.0051.803-4.005-2.673
09-4.005-4.005-2.673-4.0052.3890.0821.087-0.983-4.005-4.005-4.005-4.005-0.983-4.005-2.673-4.005
10-0.983-0.549-1.7682.321-0.315-4.005-4.005-0.9830.96-2.121-2.673-1.129-4.005-2.673-4.005-1.129
11-4.005-4.005-0.3151.087-4.005-2.673-4.005-0.387-4.005-4.005-4.005-1.507-2.121-4.005-4.0052.402
12-2.673-4.005-4.005-2.673-4.005-4.005-4.005-2.673-4.005-4.005-4.005-0.315-1.768-0.184-4.0052.632
13-1.507-4.005-4.005-4.005-0.184-4.005-4.005-4.005-4.005-4.005-4.005-4.0052.351.407-1.768-4.005
14-4.0052.21-1.7680.813-4.0051.407-4.005-4.005-4.005-4.005-4.005-1.768-4.005-4.005-4.005-4.005
15-4.005-4.005-4.005-4.0052.532-1.768-0.743-4.005-2.121-4.005-2.673-4.0050.743-4.005-1.129-4.005
16-1.507-0.549-2.1212.632-4.005-4.005-4.005-1.768-4.005-4.005-4.005-0.184-4.005-4.005-4.005-4.005
17-4.005-2.121-4.005-2.121-4.005-4.005-4.005-0.549-4.005-4.005-4.005-2.121-4.005-1.768-1.1292.668
18-4.005-4.005-4.005-4.005-4.005-2.121-2.673-2.121-4.005-4.005-4.005-1.129-4.0051.185-1.7682.465
19-4.005-4.005-4.005-4.005-0.465-0.1840.668-4.005-1.768-4.005-2.673-4.0052.384-2.6730.214-2.673
202.06-1.5070.7190.434-0.125-4.005-4.005-4.0051.053-4.005-2.121-1.3-4.005-4.005-4.005-2.673
21-0.387-2.121-1.7682.365-4.005-4.005-4.005-1.507-2.121-4.005-2.6730.694-4.005-4.005-4.0050.614
22-4.005-4.005-0.315-2.673-2.121-4.005-4.005-4.005-4.005-4.005-1.768-2.6730.4-2.6732.511-0.184
23-4.005-1.3-2.6730.254-4.005-4.005-4.005-2.6731.185-0.641-0.7432.193-4.005-0.125-4.005-2.673
24-1.507-4.005-4.0051.121-0.184-0.184-4.005-4.005-0.983-4.005-1.768-4.0051.828-2.6731.1040.082
251.899-1.768-0.465-1.768-0.184-4.005-4.005-2.6730.879-4.005-0.641-1.3-0.125-4.0050.8130.034
26-0.549-0.641-1.7682.254-2.673-4.005-4.005-2.1210.668-2.121-4.0050.293-2.673-0.016-2.673-0.856