Model info
| Transcription factor | Zbtb17 | ||||||||
| Model | ZBT17_MOUSE.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vvvvSnGGRGGMGGGGvvv | ||||||||
| Best auROC (human) | 0.797 | ||||||||
| Best auROC (mouse) | 0.947 | ||||||||
| Peak sets in benchmark (human) | 21 | ||||||||
| Peak sets in benchmark (mouse) | 25 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | unclassified {2.3.4.0} | ||||||||
| MGI | MGI:107410 | ||||||||
| EntrezGene | GeneID:22642 (SSTAR profile) | ||||||||
| UniProt ID | ZBT17_MOUSE | ||||||||
| UniProt AC | Q60821 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Zbtb17 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 50.0 | 133.0 | 276.0 | 41.0 |
| 02 | 81.0 | 109.0 | 274.0 | 36.0 |
| 03 | 89.0 | 158.0 | 228.0 | 25.0 |
| 04 | 89.0 | 73.0 | 293.0 | 45.0 |
| 05 | 42.0 | 76.0 | 337.0 | 45.0 |
| 06 | 150.0 | 110.0 | 79.0 | 161.0 |
| 07 | 22.0 | 15.0 | 451.0 | 12.0 |
| 08 | 39.0 | 26.0 | 409.0 | 26.0 |
| 09 | 81.0 | 14.0 | 388.0 | 17.0 |
| 10 | 42.0 | 7.0 | 442.0 | 9.0 |
| 11 | 7.0 | 2.0 | 490.0 | 1.0 |
| 12 | 318.0 | 146.0 | 6.0 | 30.0 |
| 13 | 61.0 | 3.0 | 422.0 | 14.0 |
| 14 | 20.0 | 8.0 | 466.0 | 6.0 |
| 15 | 70.0 | 2.0 | 411.0 | 17.0 |
| 16 | 39.0 | 22.0 | 435.0 | 4.0 |
| 17 | 179.0 | 221.0 | 64.0 | 36.0 |
| 18 | 117.0 | 72.0 | 266.0 | 45.0 |
| 19 | 66.0 | 105.0 | 291.0 | 38.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.898 | 0.061 | 0.785 | -1.09 |
| 02 | -0.427 | -0.135 | 0.778 | -1.215 |
| 03 | -0.335 | 0.232 | 0.595 | -1.561 |
| 04 | -0.335 | -0.529 | 0.845 | -1.0 |
| 05 | -1.067 | -0.49 | 0.984 | -1.0 |
| 06 | 0.18 | -0.126 | -0.452 | 0.25 |
| 07 | -1.681 | -2.034 | 1.274 | -2.234 |
| 08 | -1.138 | -1.525 | 1.177 | -1.525 |
| 09 | -0.427 | -2.096 | 1.124 | -1.92 |
| 10 | -1.067 | -2.694 | 1.254 | -2.484 |
| 11 | -2.694 | -3.573 | 1.357 | -3.903 |
| 12 | 0.926 | 0.154 | -2.819 | -1.389 |
| 13 | -0.705 | -3.325 | 1.208 | -2.096 |
| 14 | -1.77 | -2.584 | 1.307 | -2.819 |
| 15 | -0.57 | -3.573 | 1.182 | -1.92 |
| 16 | -1.138 | -1.681 | 1.238 | -3.126 |
| 17 | 0.355 | 0.565 | -0.658 | -1.215 |
| 18 | -0.065 | -0.543 | 0.749 | -1.0 |
| 19 | -0.628 | -0.172 | 0.838 | -1.163 |