Model info
| Transcription factor | ZBTB18 (GeneCards) | ||||||||
| Model | ZBT18_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bSCAGhTGYKb | ||||||||
| Best auROC (human) | 0.886 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF238-like factors {2.3.3.16} | ||||||||
| HGNC | HGNC:13030 | ||||||||
| EntrezGene | GeneID:10472 (SSTAR profile) | ||||||||
| UniProt ID | ZBT18_HUMAN | ||||||||
| UniProt AC | Q99592 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZBTB18 expression | ||||||||
| ReMap ChIP-seq dataset list | ZBTB18 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 37.0 | 72.0 | 140.0 | 251.0 |
| 02 | 58.0 | 368.0 | 72.0 | 2.0 |
| 03 | 4.0 | 492.0 | 1.0 | 3.0 |
| 04 | 486.0 | 6.0 | 3.0 | 5.0 |
| 05 | 2.0 | 7.0 | 433.0 | 58.0 |
| 06 | 224.0 | 184.0 | 15.0 | 77.0 |
| 07 | 2.0 | 5.0 | 54.0 | 439.0 |
| 08 | 1.0 | 12.0 | 474.0 | 13.0 |
| 09 | 61.0 | 134.0 | 6.0 | 299.0 |
| 10 | 30.0 | 25.0 | 225.0 | 220.0 |
| 11 | 45.0 | 133.0 | 212.0 | 110.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.189 | -0.543 | 0.112 | 0.691 |
| 02 | -0.754 | 1.072 | -0.543 | -3.573 |
| 03 | -3.126 | 1.361 | -3.903 | -3.325 |
| 04 | 1.349 | -2.819 | -3.325 | -2.961 |
| 05 | -3.573 | -2.694 | 1.234 | -0.754 |
| 06 | 0.578 | 0.383 | -2.034 | -0.477 |
| 07 | -3.573 | -2.961 | -0.823 | 1.247 |
| 08 | -3.903 | -2.234 | 1.324 | -2.163 |
| 09 | -0.705 | 0.069 | -2.819 | 0.865 |
| 10 | -1.389 | -1.561 | 0.582 | 0.56 |
| 11 | -1.0 | 0.061 | 0.523 | -0.126 |