ZBT18_HUMAN.H11MO.0.C motif - HOmo sapiens COmprehensive MOdel COllection

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We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

ZBTB18
(GeneCards)

Model

ZBT18_HUMAN.H11MO.0.C

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

ChIP-Seq

Model release

HOCOMOCOv11

Model length

11

Quality

C

Motif rank

0

Consensus

bSCAGhTGYKb

Best auROC (human)

0.886

Best auROC (mouse)

Peak sets in benchmark (human)

4

Peak sets in benchmark (mouse)

Aligned words

500

TF family

More than 3 adjacent zinc finger factors {2.3.3}

TF subfamily

ZNF238-like factors {2.3.3.16}

HGNC

EntrezGene

GeneID:10472
(SSTAR profile)

UniProt ID

UniProt AC

Q99592
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	4.738099999999999
0.0005	5.685485
0.0001	7.63282

GTEx tissue expression atlas

ZBTB18 expression

ReMap ChIP-seq dataset list

ZBTB18 datasets

Motifs in JASPAR

MA0698.1 (ZBTB18; Homo sapiens)

PCM

	A	C	G	T
01	37.0	72.0	140.0	251.0
02	58.0	368.0	72.0	2.0
03	4.0	492.0	1.0	3.0
04	486.0	6.0	3.0	5.0
05	2.0	7.0	433.0	58.0
06	224.0	184.0	15.0	77.0
07	2.0	5.0	54.0	439.0
08	1.0	12.0	474.0	13.0
09	61.0	134.0	6.0	299.0
10	30.0	25.0	225.0	220.0
11	45.0	133.0	212.0	110.0

PWM

	A	C	G	T
01	-1.189	-0.543	0.112	0.691
02	-0.754	1.072	-0.543	-3.573
03	-3.126	1.361	-3.903	-3.325
04	1.349	-2.819	-3.325	-2.961
05	-3.573	-2.694	1.234	-0.754
06	0.578	0.383	-2.034	-0.477
07	-3.573	-2.961	-0.823	1.247
08	-3.903	-2.234	1.324	-2.163
09	-0.705	0.069	-2.819	0.865
10	-1.389	-1.561	0.582	0.56
11	-1.0	0.061	0.523	-0.126