Model info
| Transcription factor | ZBTB48 (GeneCards) | ||||||||
| Model | ZBT48_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | YhAGGGAbYvdv | ||||||||
| Best auROC (human) | 0.885 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 501 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:4930 | ||||||||
| EntrezGene | GeneID:3104 (SSTAR profile) | ||||||||
| UniProt ID | ZBT48_HUMAN | ||||||||
| UniProt AC | P10074 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZBTB48 expression | ||||||||
| ReMap ChIP-seq dataset list | ZBTB48 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 16.0 | 190.0 | 52.0 | 242.0 |
| 02 | 146.0 | 150.0 | 11.0 | 193.0 |
| 03 | 487.0 | 0.0 | 7.0 | 6.0 |
| 04 | 0.0 | 0.0 | 500.0 | 0.0 |
| 05 | 4.0 | 1.0 | 495.0 | 0.0 |
| 06 | 5.0 | 7.0 | 488.0 | 0.0 |
| 07 | 403.0 | 20.0 | 71.0 | 6.0 |
| 08 | 51.0 | 253.0 | 108.0 | 88.0 |
| 09 | 69.0 | 305.0 | 30.0 | 96.0 |
| 10 | 128.0 | 81.0 | 237.0 | 54.0 |
| 11 | 71.0 | 48.0 | 136.0 | 245.0 |
| 12 | 91.0 | 157.0 | 196.0 | 56.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.975 | 0.415 | -0.86 | 0.655 |
| 02 | 0.154 | 0.18 | -2.311 | 0.43 |
| 03 | 1.351 | -4.4 | -2.694 | -2.819 |
| 04 | -4.4 | -4.4 | 1.377 | -4.4 |
| 05 | -3.126 | -3.903 | 1.367 | -4.4 |
| 06 | -2.961 | -2.694 | 1.353 | -4.4 |
| 07 | 1.162 | -1.77 | -0.556 | -2.819 |
| 08 | -0.879 | 0.699 | -0.144 | -0.346 |
| 09 | -0.584 | 0.885 | -1.389 | -0.26 |
| 10 | 0.023 | -0.427 | 0.634 | -0.823 |
| 11 | -0.556 | -0.938 | 0.083 | 0.667 |
| 12 | -0.313 | 0.225 | 0.445 | -0.788 |