We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZbtb7a
ModelZBT7A_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
B
Motif rank
0
ConsensusvRGGGKCbY
Best auROC (human)0.929
Best auROC (mouse)
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)
Aligned words500
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZBTB7 factors {2.3.3.8}
MGIMGI:1335091
EntrezGeneGeneID:16969
(SSTAR profile)
UniProt IDZBT7A_MOUSE
UniProt ACO88939
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.93889
0.0005 4.87639
0.0001 7.5386
GTEx tissue expression atlas Zbtb7a expression
Motifs in JASPAR
PCM
ACGT
01120.0113.0214.053.0
02191.03.0303.03.0
0310.00.0468.022.0
041.00.0499.00.0
053.01.0495.01.0
066.00.0202.0292.0
071.0494.01.04.0
0810.087.0167.0236.0
095.0249.0116.0130.0
PWM
ACGT
01-0.04-0.10.533-0.841
020.42-3.3250.878-3.325
03-2.394-4.41.311-1.681
04-3.903-4.41.375-4.4
05-3.325-3.9031.367-3.903
06-2.819-4.40.4750.841
07-3.9031.365-3.903-3.126
08-2.394-0.3570.2870.63
09-2.9610.683-0.0740.039