ZBTB4_HUMAN.H11MO.1.D motif - HOmo sapiens COmprehensive MOdel COllection

Transcription factor

ZBTB4
(GeneCards)

Model

ZBTB4_HUMAN.H11MO.1.D

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

Quality

Motif rank

Consensus

CRAKAGCGRTdGYGn

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

TF family

Factors with multiple dispersed zinc fingers {2.3.4}

TF subfamily

unclassified {2.3.4.0}

HGNC

HGNC:23847

EntrezGene

GeneID:57659
(SSTAR profile)

UniProt ID

ZBTB4_HUMAN

UniProt AC

Q9P1Z0
(TFClass)

Comment

Methylated DNA binding.

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	3.86741
0.0005	4.71596
0.0001	6.49391

GTEx tissue expression atlas

ZBTB4 expression

ReMap ChIP-seq dataset list

ZBTB4 datasets

Motifs in JASPAR

PCM

	A	C	G	T
01	0.824	25.406	5.77	0.0
02	18.813	4.945	5.77	2.473
03	27.879	2.473	1.648	0.0
04	2.473	0.824	8.281	20.422
05	20.422	0.0	11.578	0.0
06	6.07	0.0	25.93	0.0
07	0.0	21.469	0.0	10.531
08	0.0	0.0	32.0	0.0
09	12.18	0.0	12.402	7.418
10	0.0	0.824	7.156	24.02
11	6.015	3.503	12.647	9.835
12	0.824	0.0	26.492	4.684
13	0.0	10.531	5.77	15.699
14	2.773	0.824	28.402	0.0
15	8.693	4.533	14.24	4.533

PWM

	A	C	G	T
01	-1.657	1.086	-0.29	-2.326
02	0.797	-0.422	-0.29	-0.977
03	1.176	-0.977	-1.26	-2.326
04	-0.977	-1.657	0.031	0.876
05	0.876	-2.326	0.339	-2.326
06	-0.245	-2.326	1.106	-2.326
07	-2.326	0.924	-2.326	0.251
08	-2.326	-2.326	1.31	-2.326
09	0.386	-2.326	0.403	-0.068
10	-2.326	-1.657	-0.1	1.032
11	-0.253	-0.708	0.421	0.188
12	-1.657	-2.326	1.127	-0.468
13	-2.326	0.251	-0.29	0.625
14	-0.89	-1.657	1.194	-2.326
15	0.075	-0.496	0.533	-0.496