We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZEB1
(GeneCards)
ModelZEB1_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusbvCAGGTGhRb
Best auROC (human)0.951
Best auROC (mouse)
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)
Aligned words644
TF familyHD-ZF factors {3.1.8}
TF subfamilyZEB {3.1.8.3}
HGNCHGNC:11642
EntrezGeneGeneID:6935
(SSTAR profile)
UniProt IDZEB1_HUMAN
UniProt ACP37275
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.657109999999999
0.0005 8.941600000000001
0.0001 15.147215000000001
GTEx tissue expression atlas ZEB1 expression
ReMap ChIP-seq dataset list ZEB1 datasets
Motifs in JASPAR
MA0103.1 (ZEB1; Gallus gallus)
MA0103.2 (ZEB1; Homo sapiens)
MA0103.3 (ZEB1; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.013.025.01.075.048.037.027.068.065.028.07.017.018.039.07.0
023.0172.01.01.01.0143.00.00.00.0128.00.01.00.041.01.00.0
034.00.00.00.0484.00.00.00.02.00.00.00.02.00.00.00.0
041.00.0491.00.00.00.00.00.00.00.00.00.00.00.00.00.0
050.00.01.00.00.00.00.00.00.00.0491.00.00.00.00.00.0
060.00.00.00.00.00.00.00.00.00.00.0492.00.00.00.00.0
070.00.00.00.00.00.00.00.00.00.00.00.0105.00.0383.04.0
0853.013.030.09.00.00.00.00.0190.066.030.097.03.00.00.01.0
0938.019.0184.05.019.08.046.06.016.07.037.00.011.06.087.03.0
1014.024.034.012.07.07.05.021.040.0106.0142.066.04.02.05.03.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.583-0.844-0.204-3.1110.8840.4410.183-0.1280.7870.742-0.092-1.439-0.583-0.5270.235-1.439
02-2.2181.711-3.111-3.111-3.1111.527-4.387-4.387-4.3871.417-4.387-3.111-4.3870.285-3.111-4.387
03-1.96-4.387-4.387-4.3872.744-4.387-4.387-4.387-2.568-4.387-4.387-4.387-2.568-4.387-4.387-4.387
04-3.111-4.3872.759-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387
05-4.387-4.387-3.111-4.387-4.387-4.387-4.387-4.387-4.387-4.3872.759-4.387-4.387-4.387-4.387-4.387
06-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.3872.761-4.387-4.387-4.387-4.387
07-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.387-4.3871.219-4.3872.511-1.96
080.539-0.844-0.024-1.199-4.387-4.387-4.387-4.3871.8110.757-0.0241.14-2.218-4.387-4.387-3.111
090.209-0.4741.779-1.754-0.474-1.3120.399-1.584-0.642-1.4390.183-4.387-1.006-1.5841.032-2.218
10-0.772-0.2440.099-0.922-1.439-1.439-1.754-0.3760.261.2291.520.757-1.96-2.568-1.754-2.218