Model info
| Transcription factor | Zeb1 | ||||||||
| Model | ZEB1_MOUSE.H11MO.0.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 10 | ||||||||
| Quality | B | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | bvCAGGTRdR | ||||||||
| Best auROC (human) | 0.938 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 12 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | HD-ZF factors {3.1.8} | ||||||||
| TF subfamily | ZEB {3.1.8.3} | ||||||||
| MGI | MGI:1344313 | ||||||||
| EntrezGene | GeneID:21417 (SSTAR profile) | ||||||||
| UniProt ID | ZEB1_MOUSE | ||||||||
| UniProt AC | Q64318 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Zeb1 expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 25.0 | 137.0 | 218.0 | 120.0 |
| 02 | 181.0 | 170.0 | 114.0 | 35.0 |
| 03 | 87.0 | 406.0 | 2.0 | 5.0 |
| 04 | 487.0 | 1.0 | 1.0 | 11.0 |
| 05 | 11.0 | 2.0 | 476.0 | 11.0 |
| 06 | 5.0 | 2.0 | 484.0 | 9.0 |
| 07 | 73.0 | 7.0 | 3.0 | 417.0 |
| 08 | 157.0 | 3.0 | 336.0 | 4.0 |
| 09 | 220.0 | 40.0 | 72.0 | 168.0 |
| 10 | 104.0 | 69.0 | 301.0 | 26.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.561 | 0.091 | 0.551 | -0.04 |
| 02 | 0.366 | 0.304 | -0.091 | -1.242 |
| 03 | -0.357 | 1.17 | -3.573 | -2.961 |
| 04 | 1.351 | -3.903 | -3.903 | -2.311 |
| 05 | -2.311 | -3.573 | 1.328 | -2.311 |
| 06 | -2.961 | -3.573 | 1.345 | -2.484 |
| 07 | -0.529 | -2.694 | -3.325 | 1.196 |
| 08 | 0.225 | -3.325 | 0.981 | -3.126 |
| 09 | 0.56 | -1.114 | -0.543 | 0.293 |
| 10 | -0.181 | -0.584 | 0.872 | -1.525 |