We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorHIVEP2
(GeneCards)
ModelZEP2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
D
Motif rank
0
ConsensusKSYdbGGWAASnSS
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words16
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilyHIV EP-factors {2.3.4.5}
HGNCHGNC:4921
EntrezGeneGeneID:3097
(SSTAR profile)
UniProt IDZEP2_HUMAN
UniProt ACP31629
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.69916
0.0005 5.2938600000000005
0.0001 6.51391
GTEx tissue expression atlas HIVEP2 expression
ReMap ChIP-seq dataset list HIVEP2 datasets
Motifs in JASPAR
PCM
ACGT
011.4430.61910.0213.918
020.8253.2998.7423.134
032.4744.9480.08.577
045.3610.8254.7845.031
052.0623.2997.7532.887
063.2990.012.7010.0
073.2990.012.7010.0
087.0932.8870.06.021
0914.3510.8250.8250.0
1012.8660.01.4851.649
110.09.0723.9592.969
122.687.1342.683.505
130.8259.4025.7730.0
140.4128.7426.4330.412
PWM
ACGT
01-0.787-1.2750.825-0.018
02-1.129-0.1620.698-0.204
03-0.3930.184-1.9130.681
040.255-1.1290.1540.199
05-0.533-0.1620.588-0.271
06-0.162-1.9131.049-1.913
07-0.162-1.9131.049-1.913
080.506-0.271-1.9130.358
091.165-1.129-1.129-1.913
101.061-1.913-0.768-0.695
11-1.9130.733-0.009-0.248
12-0.330.511-0.33-0.111
13-1.1290.7660.321-1.913
14-1.4460.6980.418-1.446