We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZFP28
(GeneCards)
ModelZFP28_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length23
Quality
C
Motif rank
0
ConsensusdbddYTWYYYhdddWbTCWRTTY
Best auROC (human)0.996
Best auROC (mouse)
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)
Aligned words369
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:17801
EntrezGeneGeneID:140612
(SSTAR profile)
UniProt IDZFP28_HUMAN
UniProt ACQ8NHY6
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.59176
0.0005 11.44311
0.0001 15.36701
GTEx tissue expression atlas ZFP28 expression
ReMap ChIP-seq dataset list ZFP28 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0111.01.075.013.014.08.00.03.025.00.08.012.012.0135.09.040.0
024.01.034.023.020.018.03.0103.08.04.074.06.03.011.026.028.0
035.08.011.011.012.08.02.012.058.03.035.041.083.017.048.012.0
046.064.03.085.05.05.00.026.035.035.01.025.08.037.04.027.0
056.05.02.041.08.011.00.0122.01.04.01.02.07.019.02.0135.0
065.02.03.012.02.02.00.035.00.02.01.02.080.011.016.0193.0
076.016.03.062.08.03.00.06.01.07.01.011.010.0179.014.039.0
080.04.015.06.010.076.00.0119.02.01.011.04.06.019.014.079.0
092.02.05.09.034.04.02.060.04.013.02.021.09.043.08.0148.0
108.012.01.028.033.016.03.010.07.04.01.05.050.0141.014.033.0
1112.04.065.017.029.026.03.0115.06.03.08.02.010.02.010.054.0
1216.02.024.015.05.02.01.027.034.04.035.013.010.028.060.090.0
1310.09.011.035.011.09.011.05.028.026.029.037.019.08.092.026.0
148.00.016.044.08.04.02.038.065.04.026.048.04.05.010.084.0
152.08.062.013.01.02.03.07.03.010.032.09.018.016.092.088.0
162.00.01.021.03.00.00.033.07.01.05.0176.01.01.07.0108.0
170.011.01.01.01.01.00.00.03.08.02.00.015.0279.031.013.0
1810.00.03.06.0153.040.00.0106.017.02.05.010.02.03.02.07.0
1944.010.0113.015.042.01.02.00.06.00.03.01.089.012.022.06.0
203.020.04.0154.01.02.01.019.00.038.01.0101.01.09.01.011.0
210.01.00.04.03.06.00.060.00.01.03.03.08.09.07.0261.0
220.03.02.06.04.01.00.012.01.03.00.06.08.070.01.0249.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.715-2.8321.176-0.553-0.481-1.022-4.143-1.9310.087-4.143-1.022-0.631-0.6311.762-0.9090.552
02-1.672-2.8320.3910.005-0.132-0.235-1.9311.492-1.022-1.6721.163-1.295-1.931-0.7150.1260.199
03-1.465-1.022-0.715-0.715-0.631-1.022-2.284-0.6310.921-1.9310.420.5761.277-0.2910.733-0.631
04-1.2951.019-1.9311.301-1.465-1.465-4.1430.1260.420.42-2.8320.087-1.0220.475-1.6720.163
05-1.295-1.465-2.2840.576-1.022-0.715-4.1431.661-2.832-1.672-2.832-2.284-1.149-0.182-2.2841.762
06-1.465-2.284-1.931-0.631-2.284-2.284-4.1430.42-4.143-2.284-2.832-2.2841.241-0.715-0.3512.119
07-1.295-0.351-1.9310.987-1.022-1.931-4.143-1.295-2.832-1.149-2.832-0.715-0.8072.043-0.4810.527
08-4.143-1.672-0.414-1.295-0.8071.19-4.1431.636-2.284-2.832-0.715-1.672-1.295-0.182-0.4811.228
09-2.284-2.284-1.465-0.9090.391-1.672-2.2840.954-1.672-0.553-2.284-0.084-0.9090.624-1.0221.854
10-1.022-0.631-2.8320.1990.362-0.351-1.931-0.807-1.149-1.672-2.832-1.4650.7731.805-0.4810.362
11-0.631-1.6721.034-0.2910.2340.126-1.9311.602-1.295-1.931-1.022-2.284-0.807-2.284-0.8070.85
12-0.351-2.2840.047-0.414-1.465-2.284-2.8320.1630.391-1.6720.42-0.553-0.8070.1990.9541.358
13-0.807-0.909-0.7150.42-0.715-0.909-0.715-1.4650.1990.1260.2340.475-0.182-1.0221.380.126
14-1.022-4.143-0.3510.646-1.022-1.672-2.2840.5011.034-1.6720.1260.733-1.672-1.465-0.8071.289
15-2.284-1.0220.987-0.553-2.832-2.284-1.931-1.149-1.931-0.8070.331-0.909-0.235-0.3511.381.335
16-2.284-4.143-2.832-0.084-1.931-4.143-4.1430.362-1.149-2.832-1.4652.027-2.832-2.832-1.1491.539
17-4.143-0.715-2.832-2.832-2.832-2.832-4.143-4.143-1.931-1.022-2.284-4.143-0.4142.4860.3-0.553
18-0.807-4.143-1.931-1.2951.8870.552-4.1431.521-0.291-2.284-1.465-0.807-2.284-1.931-2.284-1.149
190.646-0.8071.585-0.4140.6-2.832-2.284-4.143-1.295-4.143-1.931-2.8321.347-0.631-0.038-1.295
20-1.931-0.132-1.6721.893-2.832-2.284-2.832-0.182-4.1430.501-2.8321.473-2.832-0.909-2.832-0.715
21-4.143-2.832-4.143-1.672-1.931-1.295-4.1430.954-4.143-2.832-1.931-1.931-1.022-0.909-1.1492.42
22-4.143-1.931-2.284-1.295-1.672-2.832-4.143-0.631-2.832-1.931-4.143-1.295-1.0221.108-2.8322.373