We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZFP42
(GeneCards)
ModelZFP42_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusbRvhKCCATTYbdbd
Best auROC (human)0.938
Best auROC (mouse)0.84
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)2
Aligned words343
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyYY1-like factors {2.3.3.9}
HGNCHGNC:30949
EntrezGeneGeneID:132625
(SSTAR profile)
UniProt IDZFP42_HUMAN
UniProt ACQ96MM3
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.7709600000000005
0.0005 9.219910000000002
0.0001 14.161760000000001
GTEx tissue expression atlas ZFP42 expression
ReMap ChIP-seq dataset list ZFP42 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
016.01.033.01.02.014.026.05.012.05.083.06.05.00.097.03.0
024.013.08.00.013.05.02.00.0117.086.026.010.05.08.00.02.0
037.06.01.0125.069.028.010.05.020.014.01.01.03.06.02.01.0
040.00.097.02.00.00.035.019.00.00.014.00.01.00.02.0129.0
050.01.00.00.00.00.00.00.012.0134.01.01.02.0148.00.00.0
060.014.00.00.00.0283.00.00.00.01.00.00.00.01.00.00.0
070.00.00.00.0296.02.00.01.00.00.00.00.00.00.00.00.0
080.00.00.0296.00.00.00.02.00.00.00.00.00.00.00.01.0
090.00.00.00.00.00.00.00.00.00.00.00.09.028.021.0241.0
102.01.02.04.02.02.00.024.04.09.01.07.08.0111.06.0116.0
110.08.01.07.04.055.057.07.00.01.02.06.02.016.015.0118.0
121.01.01.03.055.07.06.012.073.01.01.00.026.013.067.032.0
138.012.030.0105.03.06.03.010.014.08.029.024.06.05.022.014.0
1413.06.07.05.08.011.04.08.023.012.028.021.09.09.029.0106.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.097-2.6420.561-2.642-2.09-0.2830.325-1.268-0.433-1.2681.476-1.097-1.268-3.9791.632-1.736
02-1.475-0.355-0.824-3.979-0.355-1.268-2.09-3.9791.8181.5120.325-0.609-1.268-0.824-3.979-2.09
03-0.951-1.097-2.6421.8841.2930.398-0.609-1.2680.067-0.283-2.642-2.642-1.736-1.097-2.09-2.642
04-3.979-3.9791.632-2.09-3.979-3.9790.6190.016-3.979-3.979-0.283-3.979-2.642-3.979-2.091.916
05-3.979-2.642-3.979-3.979-3.979-3.979-3.979-3.979-0.4331.954-2.642-2.642-2.092.053-3.979-3.979
06-3.979-0.283-3.979-3.979-3.9792.7-3.979-3.979-3.979-2.642-3.979-3.979-3.979-2.642-3.979-3.979
07-3.979-3.979-3.979-3.9792.745-2.09-3.979-2.642-3.979-3.979-3.979-3.979-3.979-3.979-3.979-3.979
08-3.979-3.979-3.9792.745-3.979-3.979-3.979-2.09-3.979-3.979-3.979-3.979-3.979-3.979-3.979-2.642
09-3.979-3.979-3.979-3.979-3.979-3.979-3.979-3.979-3.979-3.979-3.979-3.979-0.7110.3980.1152.54
10-2.09-2.642-2.09-1.475-2.09-2.09-3.9790.246-1.475-0.711-2.642-0.951-0.8241.766-1.0971.81
11-3.979-0.824-2.642-0.951-1.4751.0671.103-0.951-3.979-2.642-2.09-1.097-2.09-0.152-0.2151.827
12-2.642-2.642-2.642-1.7361.067-0.951-1.097-0.4331.349-2.642-2.642-3.9790.325-0.3551.2630.53
13-0.824-0.4330.4661.711-1.736-1.097-1.736-0.609-0.283-0.8240.4330.246-1.097-1.2680.16-0.283
14-0.355-1.097-0.951-1.268-0.824-0.517-1.475-0.8240.204-0.4330.3980.115-0.711-0.7110.4331.72