Model info
| Transcription factor | Zfx | ||||||||
| Model | ZFX_MOUSE.H11MO.1.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 8 | ||||||||
| Quality | B | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | SYAGGCCb | ||||||||
| Best auROC (human) | 0.786 | ||||||||
| Best auROC (mouse) | 0.991 | ||||||||
| Peak sets in benchmark (human) | 10 | ||||||||
| Peak sets in benchmark (mouse) | 4 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZFX/ZFY factors {2.3.3.65} | ||||||||
| MGI | MGI:99211 | ||||||||
| EntrezGene | GeneID:22764 (SSTAR profile) | ||||||||
| UniProt ID | ZFX_MOUSE | ||||||||
| UniProt AC | P17012 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | Zfx expression | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 34.0 | 288.0 | 127.0 | 51.0 |
| 02 | 49.0 | 300.0 | 43.0 | 108.0 |
| 03 | 498.0 | 2.0 | 0.0 | 0.0 |
| 04 | 2.0 | 1.0 | 497.0 | 0.0 |
| 05 | 3.0 | 3.0 | 484.0 | 10.0 |
| 06 | 6.0 | 480.0 | 5.0 | 9.0 |
| 07 | 9.0 | 477.0 | 1.0 | 13.0 |
| 08 | 48.0 | 259.0 | 84.0 | 109.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.27 | 0.828 | 0.016 | -0.879 |
| 02 | -0.918 | 0.868 | -1.044 | -0.144 |
| 03 | 1.373 | -3.573 | -4.4 | -4.4 |
| 04 | -3.573 | -3.903 | 1.371 | -4.4 |
| 05 | -3.325 | -3.325 | 1.345 | -2.394 |
| 06 | -2.819 | 1.336 | -2.961 | -2.484 |
| 07 | -2.484 | 1.33 | -3.903 | -2.163 |
| 08 | -0.938 | 0.722 | -0.392 | -0.135 |