We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZKSCAN3
(GeneCards)
ModelZKSC3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusbbYRAGGYTAd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words138
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZKSCAN3-like factors {2.3.3.26}
HGNCHGNC:13853
EntrezGeneGeneID:80317
(SSTAR profile)
UniProt IDZKSC3_HUMAN
UniProt ACQ9BRR0
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.6201099999999995
0.0005 5.400015
0.0001 7.045565
GTEx tissue expression atlas ZKSCAN3 expression
ReMap ChIP-seq dataset list ZKSCAN3 datasets
Motifs in JASPAR
PCM
ACGT
0113.516.533.574.5
0210.545.516.565.5
0310.2594.259.2524.25
0414.258.25106.259.25
05125.02.07.04.0
061.03.0128.06.0
071.00.0136.01.0
085.2591.253.2538.25
095.54.51.5126.5
10122.03.09.04.0
1126.7521.7560.7528.75
PWM
ACGT
01-0.886-0.701-0.0280.751
02-1.1140.268-0.7010.625
03-1.1350.983-1.226-0.338
04-0.836-1.3271.101-1.226
051.262-2.403-1.468-1.921
06-2.773-2.1331.286-1.598
07-2.773-3.3681.346-2.773
08-1.7070.951-2.0760.1
09-1.669-1.83-2.5711.274
101.238-2.133-1.251-1.921
11-0.244-0.4410.551-0.175