Transcription factor | ZNF136 (GeneCards) | ||||||||
Model | ZN136_HUMAN.H11MO.0.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 24 | ||||||||
Quality | C | ||||||||
Motif rank | 0 | ||||||||
Consensus | TRCTGGRTAYARWATTCTKGGYTG | ||||||||
Best auROC (human) | 0.907 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 3 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 365 | ||||||||
TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
TF subfamily | ZNF763-like factors {2.3.3.33} | ||||||||
HGNC | HGNC:12920 | ||||||||
EntrezGene | GeneID:7695 (SSTAR profile) | ||||||||
UniProt ID | ZN136_HUMAN | ||||||||
UniProt AC | P52737 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ZNF136 expression | ||||||||
ReMap ChIP-seq dataset list | ZNF136 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 10.0 | 36.0 | 11.0 | 308.0 |
02 | 44.0 | 14.0 | 275.0 | 32.0 |
03 | 15.0 | 317.0 | 5.0 | 28.0 |
04 | 6.0 | 18.0 | 2.0 | 339.0 |
05 | 24.0 | 3.0 | 320.0 | 18.0 |
06 | 53.0 | 15.0 | 287.0 | 10.0 |
07 | 205.0 | 9.0 | 140.0 | 11.0 |
08 | 5.0 | 48.0 | 5.0 | 307.0 |
09 | 337.0 | 4.0 | 9.0 | 15.0 |
10 | 34.0 | 100.0 | 6.0 | 225.0 |
11 | 336.0 | 4.0 | 23.0 | 2.0 |
12 | 68.0 | 18.0 | 275.0 | 4.0 |
13 | 160.0 | 22.0 | 19.0 | 164.0 |
14 | 341.0 | 7.0 | 13.0 | 4.0 |
15 | 8.0 | 8.0 | 5.0 | 344.0 |
16 | 8.0 | 17.0 | 14.0 | 326.0 |
17 | 10.0 | 301.0 | 7.0 | 47.0 |
18 | 10.0 | 15.0 | 12.0 | 328.0 |
19 | 51.0 | 19.0 | 57.0 | 238.0 |
20 | 52.0 | 1.0 | 290.0 | 22.0 |
21 | 12.0 | 5.0 | 341.0 | 7.0 |
22 | 22.0 | 82.0 | 2.0 | 259.0 |
23 | 10.0 | 9.0 | 17.0 | 329.0 |
24 | 21.0 | 6.0 | 321.0 | 17.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -2.089 | -0.906 | -2.006 | 1.205 |
02 | -0.712 | -1.79 | 1.092 | -1.019 |
03 | -1.728 | 1.234 | -2.662 | -1.146 |
04 | -2.518 | -1.561 | -3.284 | 1.301 |
05 | -1.292 | -3.031 | 1.243 | -1.561 |
06 | -0.532 | -1.728 | 1.135 | -2.089 |
07 | 0.801 | -2.181 | 0.422 | -2.006 |
08 | -2.662 | -0.628 | -2.662 | 1.202 |
09 | 1.295 | -2.829 | -2.181 | -1.728 |
10 | -0.961 | 0.09 | -2.518 | 0.893 |
11 | 1.292 | -2.829 | -1.332 | -3.284 |
12 | -0.289 | -1.561 | 1.092 | -2.829 |
13 | 0.555 | -1.374 | -1.51 | 0.579 |
14 | 1.307 | -2.393 | -1.857 | -2.829 |
15 | -2.281 | -2.281 | -2.662 | 1.315 |
16 | -2.281 | -1.613 | -1.79 | 1.262 |
17 | -2.089 | 1.182 | -2.393 | -0.649 |
18 | -2.089 | -1.728 | -1.929 | 1.268 |
19 | -0.569 | -1.51 | -0.461 | 0.949 |
20 | -0.55 | -3.623 | 1.145 | -1.374 |
21 | -1.929 | -2.662 | 1.307 | -2.393 |
22 | -1.374 | -0.105 | -3.284 | 1.033 |
23 | -2.089 | -2.181 | -1.613 | 1.271 |
24 | -1.417 | -2.518 | 1.246 | -1.613 |