Model info
| Transcription factor | ZNF143 (GeneCards) | ||||||||
| Model | ZN143_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 22 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dGSMYbMTGGGAddYGTAGTYY | ||||||||
| Best auROC (human) | 0.986 | ||||||||
| Best auROC (mouse) | 0.983 | ||||||||
| Peak sets in benchmark (human) | 28 | ||||||||
| Peak sets in benchmark (mouse) | 9 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF76-like factors {2.3.3.28} | ||||||||
| HGNC | HGNC:12928 | ||||||||
| EntrezGene | GeneID:7702 (SSTAR profile) | ||||||||
| UniProt ID | ZN143_HUMAN | ||||||||
| UniProt AC | P52747 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF143 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF143 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 121.0 | 27.0 | 208.0 | 144.0 |
| 02 | 13.0 | 19.0 | 451.0 | 17.0 |
| 03 | 53.0 | 291.0 | 129.0 | 27.0 |
| 04 | 240.0 | 188.0 | 26.0 | 46.0 |
| 05 | 18.0 | 119.0 | 24.0 | 339.0 |
| 06 | 23.0 | 94.0 | 160.0 | 223.0 |
| 07 | 61.25 | 348.25 | 50.25 | 40.25 |
| 08 | 4.25 | 72.25 | 6.25 | 417.25 |
| 09 | 8.25 | 3.25 | 483.25 | 5.25 |
| 10 | 6.25 | 0.25 | 490.25 | 3.25 |
| 11 | 15.25 | 1.25 | 476.25 | 7.25 |
| 12 | 428.25 | 10.25 | 30.25 | 31.25 |
| 13 | 220.25 | 47.25 | 173.25 | 59.25 |
| 14 | 157.25 | 47.25 | 50.25 | 245.25 |
| 15 | 20.25 | 48.25 | 40.25 | 391.25 |
| 16 | 17.25 | 20.25 | 451.25 | 11.25 |
| 17 | 30.25 | 13.25 | 54.25 | 402.25 |
| 18 | 423.25 | 9.25 | 45.25 | 22.25 |
| 19 | 22.25 | 19.25 | 450.25 | 8.25 |
| 20 | 12.25 | 18.25 | 38.25 | 431.25 |
| 21 | 16.25 | 210.25 | 30.25 | 243.25 |
| 22 | 27.25 | 250.25 | 32.25 | 190.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.032 | -1.489 | 0.504 | 0.14 |
| 02 | -2.163 | -1.818 | 1.274 | -1.92 |
| 03 | -0.841 | 0.838 | 0.031 | -1.489 |
| 04 | 0.646 | 0.404 | -1.525 | -0.979 |
| 05 | -1.868 | -0.049 | -1.6 | 0.99 |
| 06 | -1.64 | -0.281 | 0.244 | 0.573 |
| 07 | -0.701 | 1.017 | -0.893 | -1.108 |
| 08 | -3.082 | -0.539 | -2.786 | 1.197 |
| 09 | -2.558 | -3.271 | 1.343 | -2.923 |
| 10 | -2.786 | -4.251 | 1.357 | -3.271 |
| 11 | -2.019 | -3.81 | 1.329 | -2.665 |
| 12 | 1.223 | -2.372 | -1.381 | -1.35 |
| 13 | 0.561 | -0.953 | 0.323 | -0.733 |
| 14 | 0.227 | -0.953 | -0.893 | 0.668 |
| 15 | -1.759 | -0.933 | -1.108 | 1.133 |
| 16 | -1.907 | -1.759 | 1.275 | -2.291 |
| 17 | -1.381 | -2.146 | -0.819 | 1.16 |
| 18 | 1.211 | -2.461 | -0.995 | -1.671 |
| 19 | -1.671 | -1.806 | 1.273 | -2.558 |
| 20 | -2.216 | -1.855 | -1.157 | 1.23 |
| 21 | -1.961 | 0.515 | -1.381 | 0.66 |
| 22 | -1.48 | 0.688 | -1.32 | 0.416 |