We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF148
(GeneCards)
ModelZN148_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length15
Quality
D
Motif rank
0
ConsensusdSvKbGGGGGhGGGR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words34
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZNF148-like factors {2.3.3.13}
HGNCHGNC:12933
EntrezGeneGeneID:7707
(SSTAR profile)
UniProt IDZN148_HUMAN
UniProt ACQ9UQR1
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.75501
0.0005 4.69956
0.0001 6.6764600000000005
GTEx tissue expression atlas ZNF148 expression
ReMap ChIP-seq dataset list ZNF148 datasets
Motifs in JASPAR
PCM
ACGT
015.3093.95816.118.623
022.8237.36519.8843.928
037.617.24214.7294.419
043.3143.43720.137.119
055.5235.7698.59214.116
060.03.43729.4581.105
073.0690.030.9310.0
080.00.034.00.0
091.5960.030.5631.841
100.00.034.00.0
1116.3257.3653.9286.383
127.1190.026.2670.614
131.1050.98231.9130.0
146.9960.026.390.614
153.9583.46824.7021.872
PWM
ACGT
01-0.416-0.6620.5940.013
02-0.929-0.1290.795-0.668
03-0.1-0.1440.509-0.571
04-0.805-0.7760.806-0.159
05-0.382-0.3440.010.469
06-2.365-0.7761.174-1.552
07-0.865-2.3651.221-2.365
08-2.365-2.3651.313-2.365
09-1.332-2.3651.209-1.237
10-2.365-2.3651.313-2.365
110.607-0.129-0.668-0.256
12-0.159-2.3651.063-1.836
13-1.552-1.6161.252-2.365
14-0.175-2.3651.067-1.836
15-0.662-0.7691.003-1.226