We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF219
(GeneCards)
ModelZN219_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length12
Quality
D
Motif rank
0
ConsensusbdGGGGGGYSGW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words26
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilyZNF219-like factors {2.3.4.2}
HGNCHGNC:13011
EntrezGeneGeneID:51222
(SSTAR profile)
UniProt IDZN219_HUMAN
UniProt ACQ9P2Y4
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.02856
0.0005 4.86166
0.0001 6.661579999999999
GTEx tissue expression atlas ZNF219 expression
ReMap ChIP-seq dataset list ZNF219 datasets
Motifs in JASPAR
PCM
ACGT
013.8614.2913.2154.634
0211.5840.8157.386.221
030.7720.38622.9111.931
040.02.31722.9110.772
050.00.38620.5945.02
060.4290.77224.0260.772
070.00.38625.2280.386
080.3860.025.6140.0
090.81511.2413.90410.04
101.1584.63419.4360.772
110.01.15823.6831.158
1214.8563.2291.6416.275
PWM
ACGT
01-0.447-0.360.651-0.295
020.528-1.5010.114-0.039
03-1.528-1.8071.177-0.98
04-2.195-0.8481.177-1.528
05-2.195-1.8071.074-0.226
06-1.772-1.5281.223-1.528
07-2.195-1.8071.27-1.807
08-1.807-2.1951.285-2.195
09-1.5010.5-0.4380.395
10-1.31-0.2951.018-1.528
11-2.195-1.311.209-1.31
120.762-0.593-1.091-0.031