Model info
| Transcription factor | ZNF281 (GeneCards) | ||||||||
| Model | ZN281_HUMAN.H11MO.0.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 15 | ||||||||
| Quality | A | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vRvdGGGGGWdGGGv | ||||||||
| Best auROC (human) | 0.968 | ||||||||
| Best auROC (mouse) | 0.972 | ||||||||
| Peak sets in benchmark (human) | 7 | ||||||||
| Peak sets in benchmark (mouse) | 3 | ||||||||
| Aligned words | 482 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF148-like factors {2.3.3.13} | ||||||||
| HGNC | HGNC:13075 | ||||||||
| EntrezGene | GeneID:23528 (SSTAR profile) | ||||||||
| UniProt ID | ZN281_HUMAN | ||||||||
| UniProt AC | Q9Y2X9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF281 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF281 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 111.0 | 86.0 | 221.0 | 64.0 |
| 02 | 98.0 | 43.0 | 291.0 | 50.0 |
| 03 | 82.0 | 87.0 | 245.0 | 68.0 |
| 04 | 134.0 | 37.0 | 84.0 | 227.0 |
| 05 | 6.0 | 4.0 | 467.0 | 5.0 |
| 06 | 2.0 | 2.0 | 470.0 | 8.0 |
| 07 | 39.0 | 8.0 | 432.0 | 3.0 |
| 08 | 5.0 | 2.0 | 472.0 | 3.0 |
| 09 | 13.0 | 2.0 | 465.0 | 2.0 |
| 10 | 367.0 | 53.0 | 1.0 | 61.0 |
| 11 | 62.0 | 1.0 | 357.0 | 62.0 |
| 12 | 5.0 | 0.0 | 472.0 | 5.0 |
| 13 | 17.0 | 3.0 | 454.0 | 8.0 |
| 14 | 41.0 | 8.0 | 421.0 | 12.0 |
| 15 | 187.0 | 120.0 | 131.0 | 44.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.081 | -0.332 | 0.601 | -0.622 |
| 02 | -0.204 | -1.008 | 0.874 | -0.862 |
| 03 | -0.379 | -0.321 | 0.703 | -0.562 |
| 04 | 0.105 | -1.153 | -0.355 | 0.627 |
| 05 | -2.784 | -3.092 | 1.345 | -2.926 |
| 06 | -3.539 | -3.539 | 1.352 | -2.548 |
| 07 | -1.102 | -2.548 | 1.268 | -3.29 |
| 08 | -2.926 | -3.539 | 1.356 | -3.29 |
| 09 | -2.127 | -3.539 | 1.341 | -3.539 |
| 10 | 1.105 | -0.805 | -3.87 | -0.669 |
| 11 | -0.653 | -3.87 | 1.078 | -0.653 |
| 12 | -2.926 | -4.37 | 1.356 | -2.926 |
| 13 | -1.884 | -3.29 | 1.317 | -2.548 |
| 14 | -1.054 | -2.548 | 1.242 | -2.198 |
| 15 | 0.435 | -0.004 | 0.083 | -0.986 |