We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF282
(GeneCards)
ModelZN282_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length14
Quality
D
Motif rank
0
ConsensusnRKRTnAKGSGARW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words36
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZNF282-like factors {2.3.3.38}
HGNCHGNC:13076
EntrezGeneGeneID:8427
(SSTAR profile)
UniProt IDZN282_HUMAN
UniProt ACQ9UDV7
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.23421
0.0005 5.94996
0.0001 7.42726
GTEx tissue expression atlas ZNF282 expression
ReMap ChIP-seq dataset list ZNF282 datasets
Motifs in JASPAR
PCM
ACGT
0110.514.55.55.5
027.750.7525.751.75
034.50.514.516.5
0415.00.018.03.0
052.00.04.030.0
065.05.06.020.0
0721.00.015.00.0
083.01.06.026.0
094.00.031.01.0
102.09.024.01.0
1110.00.025.01.0
1232.250.251.252.25
1320.53.511.50.5
1422.751.754.756.75
PWM
ACGT
010.1410.442-0.436-0.436
02-0.135-1.7940.991-1.319
03-0.606-1.9590.4420.564
040.474-2.4020.647-0.932
05-1.229-2.402-0.7041.139
06-0.518-0.518-0.3610.747
070.794-2.4020.474-2.402
08-0.932-1.652-0.3611.0
09-0.704-2.4021.17-1.652
10-1.2290.00.923-1.652
110.096-2.4020.962-1.652
121.209-2.156-1.529-1.146
130.771-0.8110.225-1.959
140.871-1.319-0.561-0.258