Transcription factor | Znf335 | ||||||||
Model | ZN335_MOUSE.H11MO.1.A | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 7 | ||||||||
Quality | A | ||||||||
Motif rank | 1 | ||||||||
Consensus | YGCCTGW | ||||||||
Best auROC (human) | 0.892 | ||||||||
Best auROC (mouse) | 0.995 | ||||||||
Peak sets in benchmark (human) | 2 | ||||||||
Peak sets in benchmark (mouse) | 4 | ||||||||
Aligned words | 123 | ||||||||
TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
TF subfamily | unclassified {2.3.4.0} | ||||||||
MGI | MGI:2682313 | ||||||||
EntrezGene | GeneID:329559 (SSTAR profile) | ||||||||
UniProt ID | ZN335_MOUSE | ||||||||
UniProt AC | A2A5K6 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | Znf335 expression | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 10.0 | 45.0 | 0.0 | 68.0 |
02 | 4.0 | 0.0 | 110.0 | 9.0 |
03 | 1.0 | 122.0 | 0.0 | 0.0 |
04 | 1.0 | 120.0 | 0.0 | 2.0 |
05 | 1.0 | 0.0 | 0.0 | 122.0 |
06 | 9.0 | 1.0 | 105.0 | 8.0 |
07 | 61.0 | 15.0 | 2.0 | 45.0 |
A | C | G | T | |
---|---|---|---|---|
01 | -1.048 | 0.369 | -3.279 | 0.773 |
02 | -1.815 | -3.279 | 1.247 | -1.142 |
03 | -2.674 | 1.35 | -3.279 | -3.279 |
04 | -2.674 | 1.333 | -3.279 | -2.3 |
05 | -2.674 | -3.279 | -3.279 | 1.35 |
06 | -1.142 | -2.674 | 1.201 | -1.245 |
07 | 0.666 | -0.679 | -2.3 | 0.369 |