We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZnf335
ModelZN335_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length7
Quality
A
Motif rank
1
ConsensusYGCCTGW
Best auROC (human)0.892
Best auROC (mouse)0.995
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)4
Aligned words123
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilyunclassified {2.3.4.0}
MGIMGI:2682313
EntrezGeneGeneID:329559
(SSTAR profile)
UniProt IDZN335_MOUSE
UniProt ACA2A5K6
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.177685
0.0005 5.56747
0.0001 7.5891
GTEx tissue expression atlas Znf335 expression
Motifs in JASPAR
PCM
ACGT
0110.045.00.068.0
024.00.0110.09.0
031.0122.00.00.0
041.0120.00.02.0
051.00.00.0122.0
069.01.0105.08.0
0761.015.02.045.0
PWM
ACGT
01-1.0480.369-3.2790.773
02-1.815-3.2791.247-1.142
03-2.6741.35-3.279-3.279
04-2.6741.333-3.279-2.3
05-2.674-3.279-3.2791.35
06-1.142-2.6741.201-1.245
070.666-0.679-2.30.369