Model info
| Transcription factor | ZNF341 (GeneCards) | ||||||||
| Model | ZN341_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 22 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dvvRvRvdRvRRddGGAASRGM | ||||||||
| Best auROC (human) | 0.845 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 499 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | unclassified {2.3.4.0} | ||||||||
| HGNC | HGNC:15992 | ||||||||
| EntrezGene | GeneID:84905 (SSTAR profile) | ||||||||
| UniProt ID | ZN341_HUMAN | ||||||||
| UniProt AC | Q9BYN7 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF341 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF341 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 103.0 | 68.0 | 256.0 | 72.0 |
| 02 | 143.0 | 82.0 | 236.0 | 38.0 |
| 03 | 110.0 | 65.0 | 277.0 | 47.0 |
| 04 | 119.0 | 65.0 | 286.0 | 29.0 |
| 05 | 145.0 | 78.0 | 243.0 | 33.0 |
| 06 | 143.0 | 37.0 | 276.0 | 43.0 |
| 07 | 130.0 | 114.0 | 238.0 | 17.0 |
| 08 | 176.0 | 37.0 | 235.0 | 51.0 |
| 09 | 112.0 | 47.0 | 293.0 | 47.0 |
| 10 | 115.0 | 80.0 | 237.0 | 67.0 |
| 11 | 158.0 | 30.0 | 273.0 | 38.0 |
| 12 | 108.0 | 76.0 | 297.0 | 18.0 |
| 13 | 203.0 | 66.0 | 141.0 | 89.0 |
| 14 | 143.0 | 20.0 | 262.0 | 74.0 |
| 15 | 52.0 | 7.0 | 426.0 | 14.0 |
| 16 | 40.0 | 34.0 | 404.0 | 21.0 |
| 17 | 429.0 | 22.0 | 44.0 | 4.0 |
| 18 | 349.0 | 5.0 | 142.0 | 3.0 |
| 19 | 50.0 | 163.0 | 273.0 | 13.0 |
| 20 | 391.0 | 14.0 | 56.0 | 38.0 |
| 21 | 3.0 | 14.0 | 471.0 | 11.0 |
| 22 | 68.0 | 367.0 | 54.0 | 10.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.189 | -0.597 | 0.713 | -0.541 |
| 02 | 0.135 | -0.413 | 0.632 | -1.161 |
| 03 | -0.124 | -0.641 | 0.791 | -0.956 |
| 04 | -0.047 | -0.641 | 0.823 | -1.419 |
| 05 | 0.149 | -0.462 | 0.661 | -1.296 |
| 06 | 0.135 | -1.187 | 0.787 | -1.042 |
| 07 | 0.041 | -0.089 | 0.64 | -1.918 |
| 08 | 0.341 | -1.187 | 0.627 | -0.877 |
| 09 | -0.106 | -0.956 | 0.847 | -0.956 |
| 10 | -0.08 | -0.437 | 0.636 | -0.611 |
| 11 | 0.234 | -1.387 | 0.776 | -1.161 |
| 12 | -0.142 | -0.488 | 0.86 | -1.866 |
| 13 | 0.482 | -0.626 | 0.121 | -0.333 |
| 14 | 0.135 | -1.768 | 0.736 | -0.514 |
| 15 | -0.858 | -2.692 | 1.219 | -2.094 |
| 16 | -1.112 | -1.268 | 1.167 | -1.723 |
| 17 | 1.226 | -1.679 | -1.02 | -3.124 |
| 18 | 1.021 | -2.959 | 0.128 | -3.323 |
| 19 | -0.896 | 0.265 | 0.776 | -2.161 |
| 20 | 1.134 | -2.094 | -0.786 | -1.161 |
| 21 | -3.323 | -2.094 | 1.319 | -2.309 |
| 22 | -0.597 | 1.071 | -0.821 | -2.392 |