We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF341
(GeneCards)
ModelZN341_HUMAN.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
C
Motif rank
1
ConsensusGGAASAGCh
Best auROC (human)0.813
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words500
TF familyFactors with multiple dispersed zinc fingers {2.3.4}
TF subfamilyunclassified {2.3.4.0}
HGNCHGNC:15992
EntrezGeneGeneID:84905
(SSTAR profile)
UniProt IDZN341_HUMAN
UniProt ACQ9BYN7
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.697015
0.0005 5.69267
0.0001 7.33727
GTEx tissue expression atlas ZNF341 expression
ReMap ChIP-seq dataset list ZNF341 datasets
Motifs in JASPAR
PCM
ACGT
0192.010.0390.08.0
0224.032.0421.023.0
03460.015.025.00.0
04449.05.043.03.0
0536.0279.0161.024.0
06442.016.021.021.0
073.02.0489.06.0
0828.0461.07.04.0
0987.0253.066.094.0
PWM
ACGT
01-0.302-2.3941.129-2.584
02-1.6-1.3281.206-1.64
031.294-2.034-1.561-4.4
041.27-2.961-1.044-3.325
05-1.2150.7960.25-1.6
061.254-1.975-1.725-1.725
07-3.325-3.5731.355-2.819
08-1.4541.296-2.694-3.126
09-0.3570.699-0.628-0.281