Model info
| Transcription factor | ZNF341 (GeneCards) | ||||||||
| Model | ZN341_HUMAN.H11MO.1.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | C | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | GGAASAGCh | ||||||||
| Best auROC (human) | 0.813 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | unclassified {2.3.4.0} | ||||||||
| HGNC | HGNC:15992 | ||||||||
| EntrezGene | GeneID:84905 (SSTAR profile) | ||||||||
| UniProt ID | ZN341_HUMAN | ||||||||
| UniProt AC | Q9BYN7 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF341 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF341 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 92.0 | 10.0 | 390.0 | 8.0 |
| 02 | 24.0 | 32.0 | 421.0 | 23.0 |
| 03 | 460.0 | 15.0 | 25.0 | 0.0 |
| 04 | 449.0 | 5.0 | 43.0 | 3.0 |
| 05 | 36.0 | 279.0 | 161.0 | 24.0 |
| 06 | 442.0 | 16.0 | 21.0 | 21.0 |
| 07 | 3.0 | 2.0 | 489.0 | 6.0 |
| 08 | 28.0 | 461.0 | 7.0 | 4.0 |
| 09 | 87.0 | 253.0 | 66.0 | 94.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.302 | -2.394 | 1.129 | -2.584 |
| 02 | -1.6 | -1.328 | 1.206 | -1.64 |
| 03 | 1.294 | -2.034 | -1.561 | -4.4 |
| 04 | 1.27 | -2.961 | -1.044 | -3.325 |
| 05 | -1.215 | 0.796 | 0.25 | -1.6 |
| 06 | 1.254 | -1.975 | -1.725 | -1.725 |
| 07 | -3.325 | -3.573 | 1.355 | -2.819 |
| 08 | -1.454 | 1.296 | -2.694 | -3.126 |
| 09 | -0.357 | 0.699 | -0.628 | -0.281 |