ZN384_HUMAN.H11MO.0.C motif - HOmo sapiens COmprehensive MOdel COllection

We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.

Model info

Transcription factor

ZNF384
(GeneCards)

Model

ZN384_HUMAN.H11MO.0.C

Model type

Mononucleotide PWM

LOGO

LOGO (reverse complement)

Data source

Integrative

Model release

HOCOMOCOv9

Model length

12

Quality

C

Motif rank

0

Consensus

SGAAAAAvbnbv

Best auROC (human)

Best auROC (mouse)

Peak sets in benchmark (human)

Peak sets in benchmark (mouse)

Aligned words

39

TF family

More than 3 adjacent zinc finger factors {2.3.3}

TF subfamily

ZNF362-like factors {2.3.3.37}

HGNC

EntrezGene

GeneID:171017
(SSTAR profile)

UniProt ID

UniProt AC

Q8TF68
(TFClass)

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	5.83543
0.0005	6.7666900000000005
0.0001	8.243315

GTEx tissue expression atlas

ZNF384 expression

ReMap ChIP-seq dataset list

ZNF384 datasets

Motifs in JASPAR

MA1125.1 (ZNF384; Homo sapiens)

PCM

	A	C	G	T
01	5.389	5.5	25.5	2.5
02	0.0	16.0	22.889	0.0
03	38.889	0.0	0.0	0.0
04	38.889	0.0	0.0	0.0
05	38.889	0.0	0.0	0.0
06	38.889	0.0	0.0	0.0
07	38.889	0.0	0.0	0.0
08	14.0	10.0	13.889	1.0
09	5.0	12.0	6.0	15.889
10	9.0	15.889	7.0	7.0
11	4.0	8.0	16.889	10.0
12	6.25	13.139	15.25	4.25

PWM

	A	C	G	T
01	-0.523	-0.506	0.91	-1.136
02	-2.453	0.464	0.805	-2.453
03	1.32	-2.453	-2.453	-2.453
04	1.32	-2.453	-2.453	-2.453
05	1.32	-2.453	-2.453	-2.453
06	1.32	-2.453	-2.453	-2.453
07	1.32	-2.453	-2.453	-2.453
08	0.338	0.026	0.331	-1.715
09	-0.587	0.194	-0.431	0.457
10	-0.07	0.457	-0.296	-0.296
11	-0.772	-0.177	0.515	0.026
12	-0.395	0.279	0.418	-0.722