Transcription factor | ZNF410 (GeneCards) | ||||||||
Model | ZN410_HUMAN.H11MO.0.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | ![]() | ||||||||
LOGO (reverse complement) | ![]() | ||||||||
Data source | HT-SELEX | ||||||||
Model release | HOCOMOCOv10 | ||||||||
Model length | 13 | ||||||||
Quality | D | ||||||||
Motif rank | 0 | ||||||||
Consensus | TATTATGGGATGb | ||||||||
Best auROC (human) | |||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | |||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 1227 | ||||||||
TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
TF subfamily | MTF1-like factors {2.3.3.24} | ||||||||
HGNC | HGNC:20144 | ||||||||
EntrezGene | GeneID:57862 (SSTAR profile) | ||||||||
UniProt ID | ZN410_HUMAN | ||||||||
UniProt AC | Q86VK4 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ZNF410 expression | ||||||||
ReMap ChIP-seq dataset list | ZNF410 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 28.0 | 45.0 | 20.0 | 1134.0 |
02 | 1199.0 | 9.0 | 10.0 | 9.0 |
03 | 5.75 | 6.75 | 5.75 | 1208.75 |
04 | 4.0 | 4.0 | 4.0 | 1215.0 |
05 | 1216.75 | 2.75 | 3.75 | 3.75 |
06 | 2.25 | 2.25 | 1.25 | 1221.25 |
07 | 0.75 | 0.75 | 1224.75 | 0.75 |
08 | 2.0 | 1.0 | 1223.0 | 1.0 |
09 | 1.0 | 1.0 | 1187.0 | 38.0 |
10 | 1133.25 | 68.25 | 10.25 | 15.25 |
11 | 5.25 | 3.25 | 3.25 | 1215.25 |
12 | 141.75 | 29.75 | 1025.75 | 29.75 |
13 | 40.25 | 168.25 | 551.25 | 467.25 |
A | C | G | T | |
---|---|---|---|---|
01 | -2.338 | -1.886 | -2.651 | 1.303 |
02 | 1.359 | -3.354 | -3.266 | -3.354 |
03 | -3.713 | -3.588 | -3.713 | 1.367 |
04 | -3.978 | -3.978 | -3.978 | 1.372 |
05 | 1.374 | -4.222 | -4.022 | -4.022 |
06 | -4.339 | -4.339 | -4.624 | 1.377 |
07 | -4.804 | -4.804 | 1.38 | -4.804 |
08 | -4.403 | -4.71 | 1.379 | -4.71 |
09 | -4.71 | -4.71 | 1.349 | -2.048 |
10 | 1.303 | -1.483 | -3.245 | -2.897 |
11 | -3.782 | -4.117 | -4.117 | 1.372 |
12 | -0.765 | -2.281 | 1.203 | -2.281 |
13 | -1.993 | -0.596 | 0.584 | 0.419 |