Model info
| Transcription factor | ZNF418 (GeneCards) | ||||||||
| Model | ZN418_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 17 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TGYTTYYRKYYdMYbnb | ||||||||
| Best auROC (human) | 0.906 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | ZNF417-like factors {2.3.4.1} | ||||||||
| HGNC | HGNC:20647 | ||||||||
| EntrezGene | GeneID:147686 (SSTAR profile) | ||||||||
| UniProt ID | ZN418_HUMAN | ||||||||
| UniProt AC | Q8TF45 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF418 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF418 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 26.0 | 6.0 | 21.0 | 447.0 |
| 02 | 19.0 | 8.0 | 457.0 | 16.0 |
| 03 | 108.0 | 272.0 | 9.0 | 111.0 |
| 04 | 13.0 | 28.0 | 4.0 | 455.0 |
| 05 | 1.0 | 25.0 | 11.0 | 463.0 |
| 06 | 16.0 | 221.0 | 29.0 | 234.0 |
| 07 | 29.0 | 143.0 | 11.0 | 317.0 |
| 08 | 291.0 | 9.0 | 178.0 | 22.0 |
| 09 | 9.0 | 17.0 | 317.0 | 157.0 |
| 10 | 5.0 | 335.0 | 12.0 | 148.0 |
| 11 | 5.0 | 278.0 | 1.0 | 216.0 |
| 12 | 110.0 | 60.0 | 70.0 | 260.0 |
| 13 | 90.0 | 323.0 | 59.0 | 28.0 |
| 14 | 78.0 | 114.0 | 6.0 | 302.0 |
| 15 | 40.0 | 51.0 | 143.0 | 266.0 |
| 16 | 103.0 | 188.0 | 119.0 | 90.0 |
| 17 | 64.0 | 235.0 | 82.0 | 119.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.525 | -2.819 | -1.725 | 1.265 |
| 02 | -1.818 | -2.584 | 1.287 | -1.975 |
| 03 | -0.144 | 0.771 | -2.484 | -0.117 |
| 04 | -2.163 | -1.454 | -3.126 | 1.283 |
| 05 | -3.903 | -1.561 | -2.311 | 1.3 |
| 06 | -1.975 | 0.565 | -1.421 | 0.621 |
| 07 | -1.421 | 0.133 | -2.311 | 0.923 |
| 08 | 0.838 | -2.484 | 0.35 | -1.681 |
| 09 | -2.484 | -1.92 | 0.923 | 0.225 |
| 10 | -2.961 | 0.978 | -2.234 | 0.167 |
| 11 | -2.961 | 0.793 | -3.903 | 0.542 |
| 12 | -0.126 | -0.721 | -0.57 | 0.726 |
| 13 | -0.324 | 0.942 | -0.737 | -1.454 |
| 14 | -0.464 | -0.091 | -2.819 | 0.875 |
| 15 | -1.114 | -0.879 | 0.133 | 0.749 |
| 16 | -0.191 | 0.404 | -0.049 | -0.324 |
| 17 | -0.658 | 0.626 | -0.415 | -0.049 |